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GoSemSim - function mgeneSim() is resulting in similarity matrix without 1s on diagonal
GOSim GOSemSim
updated 23 months ago by ▴ 760 • written 23 months ago by ▴ 10
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911
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I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db GOfuncR GO GOSim goProfiles
updated 2.3 years ago by ▴ 780 • written 2.3 years ago by • 0
3
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3
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1.0k
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compute similarities of GOTerms with GOSim in non-human species
GOSim
updated 6.3 years ago by ▴ 760 • written 6.3 years ago by ▴ 10
0
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1
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1.6k
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Normalization of specificity level (level of depth) of GO terms dataset
gosim gosemsim
updated 7.8 years ago by ▴ 760 • written 9.3 years ago by ▴ 10
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2
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2.3k
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GOSim yeast
GO Yeast GOSim GO Yeast GOSim
updated 7.9 years ago by • 0 • written 12.7 years ago by ★ 13k
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1.1k
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GOSim Problem
Yeast Organism GOSim Yeast Organism GOSim
12.3 years ago Pablo Andretta Jaskowiak ▴ 10
0
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939
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Problem while working with GOSim package
GOSim GOSim
12.4 years ago ANIRBAN BHAR ▴ 60
0
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2
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1.5k
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Simple GO pie and GOSim install error
GO Organism biomaRt GOSim GO Organism biomaRt GOSim
updated 13.4 years ago by ▴ 40 • written 13.4 years ago by ★ 7.2k
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0
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1.4k
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Simple GO pie and GOSim install error
GO Organism biomaRt GOSim GO Organism biomaRt GOSim
13.4 years ago Olivier Lucas ▴ 40
0
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3
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1.4k
views
Query Gene Ontology
GOSim GOSim
updated 13.7 years ago by ★ 13k • written 13.7 years ago by ▴ 10
0
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1
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1.4k
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Gene ID of yeast in GOSemSim and other GO related package may need update
Annotation GO Yeast biomaRt GOSemSim GOSim Annotation GO Yeast biomaRt GOSemSim GOSim
updated 15.4 years ago by ★ 7.2k • written 15.4 years ago by ▴ 20
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Answer: Postdoc/RA position: Software Engineer For R and High-Performance Computing by delhirussianescortscom • 0
Our escorts are well-groomed and well-trained to give you ultimate seduction and deep pleasure. If you're looking for hot Delhi air hostess…
Answer: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Following the discussion of this post, the package [gDNAx](https://bioconductor.org/packages/gDNAx) has been fixed in devel and release 1.4…
Answer: Selection of correct coefficients or contrasts in DESeq2 by James W. MacDonald 67k
Using R's model formulation for three-way interactions is probably not the way to go here. Or at least I wouldn't do it that way. An easier…
Comment: How to generate circular cnetplot and color nodes and edges in the same plot ? by Blandine • 0
Thank you so much ! It's working !
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by James W. MacDonald 67k
Yes. If you have the Illumina IDs, then all the annotation data that `cpg.annotate` uses will be based on hg19. It doesn't matter if TCGA l…
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Comment: Recount3 data correspond to TCGA data
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