Bioconductor Graphite

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graphite bioclite

8.9 years ago mhlinder • 0

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Pathways Breast siggenes PROcess cycle graphite Pathways Breast siggenes PROcess cycle

updated 11.2 years ago by Enrica ▴ 20 • written 11.2 years ago by array chip ▴ 420

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graphite potra

6.2 years ago • updated 6.1 years ago genomic8328 ▴ 10

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graphite spia runSPIA

updated 5.3 years ago by Bioconductor Community 0 • written 9.2 years ago by rgamini • 0

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graphite

updated 9.1 years ago by gabriele.sales ▴ 100 • written 9.1 years ago by rgamini • 0

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graphite

updated 16 hours ago by Michael Love 42k • written 1 day ago by fduguchunhui • 0

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Transcription Pathways Leukemia graphite Transcription Pathways Leukemia graphite

11.9 years ago Hamid Bolouri ▴ 90

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1.7k

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Pathways SPIA cycle graphite Pathways SPIA cycle graphite

10.3 years ago array chip ▴ 420

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graphite

2.4 years ago • updated 2.3 years ago x • 0

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graphite graphite

updated 12.0 years ago by Paul Shannon ▴ 750 • written 12.0 years ago by Hamid Bolouri ▴ 90

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reactomepa reactome graphite

updated 7.3 years ago by gabriele.sales ▴ 100 • written 7.3 years ago by i.sudbery ▴ 40

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bioconductor graphite pathway analysis

updated 7.2 years ago by gabriele.sales ▴ 100 • written 7.2 years ago by haoran.chen • 0

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bioconductor graphite kegg pathway analysis

updated 7.2 years ago by gabriele.sales ▴ 100 • written 7.2 years ago by haoran.chen • 0

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1.2k

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graphite

updated 5.5 years ago by gabriele.sales ▴ 100 • written 5.5 years ago by Lluís Revilla Sancho ▴ 730

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820

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graphite interaction

updated 4.0 years ago by gabriele.sales ▴ 100 • written 4.1 years ago by emisecherre • 0

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2.6k

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goseq graphite

9.2 years ago • updated 7.4 years ago b.nota ▴ 360

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Pathways graphite Pathways graphite

10.0 years ago Ryan C. Thompson ★ 7.9k

17 results • Page 1 of 1

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

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Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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Popular Question to WouterDeCoster ▴ 130

Scholar to Michael Love 42k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k