Showing : hgug4112a • reset
3
votes
9
replies
3.2k
views
Annotation problem while quering hgug4112a.db with function select and duplicates for agilent microarray dataset
limma annotation agilent hgug4112a microarray
10.0 years ago Konstantinos Yeles ▴ 90
0
votes
0
replies
1.5k
views
virtualArray package
Annotation Preprocessing hgu133plus2 hgug4112a
11.4 years ago Guest User ★ 13k
0
votes
0
replies
10.0k
views
virtualArray vignette does not work: 'data' must be of a vector type, was 'NULL'
Microarray Annotation Preprocessing hgu133plus2 hgug4112a virtualArray Microarray hgug4112a
11.6 years ago Guest User ★ 13k
0
votes
1
reply
1.2k
views
hgug4845a.db - error in the lookUp function when running genes.rpt.agi
Annotation hgug4112a Annotation hgug4112a
updated 12.3 years ago by 68k • written 12.3 years ago by ▴ 10
0
votes
0
replies
1.5k
views
Quantiles from virtualArray example without batcheffect removal are all the same
Microarray BatchEffect hgu133plus2 hgug4112a virtualArray Microarray BatchEffect hgug4112a
12.8 years ago Daniel Emden ▴ 10
0
votes
0
replies
1.4k
views
Mapping genes to their gene sets for GSEA
Microarray Genetics GO hgu95av2 hgug4112a Microarray Genetics GO hgu95av2 hgug4112a
13.7 years ago Yoo, Seungyeul ▴ 110
0
votes
1
reply
1.1k
views
How to create annotation package for not a supported organism
Annotation GO Organism hgug4112a Annotation GO Organism hgug4112a
updated 14.4 years ago by ★ 6.8k • written 14.4 years ago by ▴ 90
0
votes
0
replies
1.2k
views
FW: normalization one color microarrays
Normalization hgug4112a PROcess Agi4x44PreProcess Normalization hgug4112a PROcess
14.4 years ago Paz Tapia Ramirez ▴ 150
0
votes
1
reply
1.5k
views
Agi4x44PreProcess: INPUT DATA DOES NOT CONTAIN - Sequence and chr_coord SCANN THE DATA USING AFE 9.5.3.1 Error in read.AgilentFE(targets, makePLOT = …
hgug4112a Agi4x44PreProcess hgug4112a Agi4x44PreProcess
updated 15.5 years ago by ▴ 460 • written 15.5 years ago by ▴ 20
0
votes
1
reply
1.1k
views
Problem with createAnnObjs.HUMANCHIP_DB
hgug4112a RmiR hgug4112a RmiR
updated 15.7 years ago by 25k • written 15.7 years ago by ▴ 10
0
votes
2
replies
1.3k
views
Agilent annotation source
Annotation hgug4112a oligo Annotation hgug4112a oligo
updated 16.0 years ago by 68k • written 16.0 years ago by ★ 1.1k
0
votes
0
replies
1.1k
views
Questions on the package "RmiR"
miRNA hgug4112a RmiR miRNA hgug4112a RmiR
16.0 years ago jason0701 ▴ 190
0
votes
0
replies
1.1k
views
Agi4x44PreProcess 1.4.0 question: use of genes.rpt.agi() and Gene Sets
hgug4112a probe limma Agi4x44PreProcess hgug4112a probe limma Agi4x44PreProcess
16.1 years ago Pedro Lopez-Romero ▴ 120
0
votes
0
replies
1.6k
views
on the meaning and value of $stdev.unscaled in a limma's lmFitted MArrayLM object
GO hgug4112a probe GO hgug4112a probe
16.2 years ago Massimo Pinto ▴ 390
0
votes
0
replies
1.1k
views
error while using genefilter's nsFilter: could not find function "hgug4112a.db_dbconn"
Annotation hgug4112a Annotation hgug4112a
16.3 years ago Massimo Pinto ▴ 390
0
votes
3
replies
2.2k
views
error while using genefilter's nsFilter: could not find function "hgug4112a.db_dbconn"
hgug4112a hgug4112a
updated 16.3 years ago by ★ 5.5k • written 16.3 years ago by ▴ 390
0
votes
11
replies
2.7k
views
Agi4x44PreProcess 1.4.0 question: use of genes.rpt.agi() and Gene Sets
hgug4112a hgug4112a
updated 16.3 years ago by ★ 1.3k • written 16.3 years ago by ▴ 390
0
votes
2
replies
9.9k
views
an apparently strange case of 'Warning: number of items to replace is not a multiple of replacement length'
GO hgug4112a GO hgug4112a
updated 16.3 years ago by 68k • written 16.3 years ago by ▴ 390
0
votes
0
replies
1.1k
views
build.mappings() from Agi4x44PreProcess is not helping me today
GO GUI hgug4112a limma PROcess Agi4x44PreProcess GO GUI hgug4112a limma PROcess
16.6 years ago Massimo Pinto ▴ 390
0
votes
1
reply
1.5k
views
GOstats: HyperGTest for KEGG
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
updated 17.0 years ago by ★ 7.2k • written 17.0 years ago by ▴ 180
0
votes
0
replies
1.6k
views
GOstats: hyperGTest for KEGG with org.Sc.sgd.db
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
17.1 years ago Paul Evans ▴ 180
0
votes
2
replies
2.0k
views
Agilent G4112F with hgug4112a.db?
GO hgug4112a GO hgug4112a
updated 17.2 years ago by ★ 1.3k • written 17.2 years ago by ▴ 190
0
votes
1
reply
1.2k
views
Agilent spike-in probes
Annotation Normalization GO hgug4112a limma Annotation Normalization GO hgug4112a limma
updated 17.8 years ago by 21k • written 17.8 years ago by ▴ 600
0
votes
1
reply
1.2k
views
Agilent spike-in probes
Annotation Normalization GO hgug4112a limma Annotation Normalization GO hgug4112a limma
updated 17.9 years ago by ★ 6.0k • written 17.9 years ago by 21k
24 results • Page 1 of 1
Recent ...
Replies
Comment: msmsTests, inconsistent sign between lFC.Av and LogFC by Ben • 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis by James W. MacDonald 68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list' by varying.mastodon.isyn • 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Votes
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
Answer: Confused about the CPM and TMM normalization in edgeR
A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
Awards • All
Popular Question to James W. MacDonald 68k
Popular Question to rcavalca ▴ 140
Popular Question to James Aiden • 0
Popular Question to shepherl 4.3k
Popular Question to fl ▴ 20
Locations • All
United States, 16 minutes ago
United States, 24 minutes ago
Belgium, 26 minutes ago
Germany, 34 minutes ago
United States, 58 minutes ago
Traffic: 1825 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6