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hicdcplus
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Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCPlus)
HiC
HiCDCPlus
written 12 days ago by
Chaoability
• 0
0
votes
0
replies
454
views
HiCDCPlus differential interaction error
HiCDCPlus
22 months ago
Irene
• 0
0
votes
2
replies
801
views
Java error while running HiCDC overview code
JuicerTools
HiC
HiCDCPlus
Java
Juicer
written 2.0 years ago by
IsMM
• 0
0
votes
1
reply
857
views
HiCDCPlus glm.fit error
HiCDCPlus
updated 2.5 years ago by
merve.sahn
• 0 • written 2.6 years ago by
ehamrud
• 0
0
votes
1
reply
784
views
HiCDCPlus extract_hic_eigenvectors() only works with larger bin sizes (> =250kb )?
HiCDCPlus
updated 2.5 years ago by
merve.sahn
• 0 • written 2.7 years ago by
mlin18
• 0
0
votes
1
reply
1.5k
views
Error in loadFUN(x, seqname, ranges) : trying to load regions beyond the boundaries of non-circular sequence "chr2"
HiCDCPlus
BSgenome.Hsapiens.UCSC.hg38
updated 2.5 years ago by
merve.sahn
• 0 • written 3.0 years ago by
Yue
• 0
0
votes
1
reply
851
views
HiCDCPlus `construct_features` incompatible with BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 annotation
HiC-DC+
HiCDCPlus
updated 2.5 years ago by
merve.sahn
• 0 • written 3.1 years ago by
Yue
• 0
0
votes
2
replies
1.1k
views
Could I use HiCDCPlus in plant genome?
HiC-DC+
HiCDCPlus
updated 3.4 years ago by
scott
• 0 • written 3.8 years ago by
1037144675
• 0
0
votes
1
reply
1.2k
views
HiCDCPlus with NO replicates
hicdcdiff
HiCDCPlus
updated 3.6 years ago by
merve.sahn
• 0 • written 3.9 years ago by
ta_awwad
▴ 10
0
votes
2
replies
1.8k
views
HicDCplus error, R_Reprotect: only 4 protected items, can't reprotect index -1 (from gi_list_write)
hicd
HiCDCPlus
updated 2.8 years ago by
Michelle
• 0 • written 4.0 years ago by
gamma.jian
▴ 10
0
votes
1
reply
1.0k
views
HiC-DC+ Distance / Model Fitting error when running HiCDCPlus()
HiC-DC+
HiCDCPlus
updated 3.6 years ago by
merve.sahn
• 0 • written 4.4 years ago by
Hannah
• 0
3
votes
7
replies
3.1k
views
Which version of R to use for "HiCDCPlus" "HiC-DC+"
HiC-DC+
HiCDCPlus
BiocParallel
updated 4.8 years ago by
koushik
• 0 • written 5.1 years ago by
Tay
▴ 10
0
votes
3
replies
1.3k
views
HiCDCPlus / HiC-DC+ is not found
HiCDCPlus
HiC-DC+
HiCcompare
HiC
updated 3.6 years ago by
merve.sahn
• 0 • written 5.1 years ago by
mtS
• 0
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53k
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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
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