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lpe
•
reset
0
votes
0
replies
903
views
PLPE error
Microarray
affy
LPE
PLPE
Microarray
affy
LPE
PLPE
15.3 years ago
Dennis.Burian@faa.gov
▴ 90
0
votes
18
replies
2.3k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer
gcrma
LPE
affylmGUI
Cancer
gcrma
LPE
affylmGUI
updated 15.5 years ago by
Charlie Whittaker
▴ 70 • written 15.5 years ago by
Wolfgang Huber
★ 13k
0
votes
2
replies
1.0k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer
gcrma
LPE
Cancer
gcrma
LPE
updated 15.5 years ago by
Patrick Aboyoun
★ 1.6k • written 15.5 years ago by
Charlie Whittaker
▴ 70
0
votes
3
replies
1.6k
views
Bioconductor 2.3 is released
aCGH
Sequencing
miRNA
Microarray
Visualization
Bayesian
Classification
Survival
Yeast
LPE
15.5 years ago
Patrick Aboyoun
★ 1.6k
0
votes
0
replies
765
views
A friendly mention of LPE package
LPE
LPE
16.2 years ago
pingzhao Hu
▴ 210
0
votes
3
replies
2.6k
views
Inherits(x,"data.frame") error in SamR
Microarray
Normalization
Preprocessing
Bayesian
Clustering
TimeCourse
Cancer
affy
vsn
LPE
18.2 years ago
McGee, Monnie
▴ 300
0
votes
0
replies
851
views
LPE question
LPE
LPE
18.2 years ago
Jain, Nitin
▴ 70
0
votes
0
replies
874
views
incoherence with LPE
LPE
LPE
18.7 years ago
Jain, Nitin
▴ 70
0
votes
0
replies
857
views
LPE method based on RMA vs. MAS5
Preprocessing
LPE
Preprocessing
LPE
18.7 years ago
Jain, Nitin
▴ 70
0
votes
0
replies
828
views
pools and tech rep
limma
LPE
limma
LPE
18.9 years ago
Ariel Chernomoretz
▴ 380
0
votes
1
reply
982
views
FDR adjustment in LPE
LPE
LPE
updated 18.9 years ago by
Jain, Nitin
▴ 70 • written 18.9 years ago by
jean-louis.ruelle@gskbio.com
▴ 40
0
votes
1
reply
944
views
local pooled error
LPE
LPE
updated 19.0 years ago by
A.J. Rossini
▴ 210 • written 19.0 years ago by
Lana Schaffer
★ 1.3k
0
votes
0
replies
839
views
LPE
cdf
affy
LPE
ASSIGN
cdf
affy
LPE
ASSIGN
19.1 years ago
Jain, Nitin
▴ 70
0
votes
1
reply
1.1k
views
Help with LPE error message
LPE
LPE
updated 19.1 years ago by
Jain, Nitin
▴ 70 • written 19.1 years ago by
Puhong Gao
▴ 140
0
votes
0
replies
809
views
LPE
cdf
affy
LPE
ASSIGN
cdf
affy
LPE
ASSIGN
19.2 years ago
Harry Hurd
▴ 60
0
votes
1
reply
1.0k
views
LPE errors
LPE
LPE
updated 19.4 years ago by
Jain, Nitin
▴ 70 • written 19.4 years ago by
Stephanie Mewborn
▴ 40
0
votes
0
replies
1.0k
views
LPE error and warnings
LPE
LPE
19.5 years ago
Stephanie Mewborn
▴ 40
0
votes
1
reply
1.2k
views
problem with LPE
LPE
LPE
updated 20.2 years ago by
Nitin Jain
▴ 30 • written 20.2 years ago by
Phguardiol@aol.com
▴ 720
0
votes
7
replies
1.6k
views
Statistical comparison of low replicate affy data
affy
gcrma
siggenes
LPE
affy
gcrma
siggenes
LPE
20.2 years ago
Matthew Hannah
▴ 940
0
votes
0
replies
945
views
Limma or something else ? plus Normalization question
Normalization
affy
limma
LPE
PROcess
Normalization
affy
limma
LPE
PROcess
20.6 years ago
Gordon Smyth
50k
0
votes
1
reply
955
views
Limma or something else ? plus Normalization question
limma
LPE
PROcess
limma
LPE
PROcess
updated 20.6 years ago by
Gordon Smyth
50k • written 20.6 years ago by
Phguardiol@aol.com
▴ 720
0
votes
0
replies
900
views
question about RMA and filtering
affy
LPE
affy
LPE
20.8 years ago
Phguardiol@aol.com
▴ 720
22 results • Page
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Replies
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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41k
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