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motifbreakr
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Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings
aminoacid
motifbreakR
written 17 months ago by
wilson_ava
• 0
0
votes
0
replies
1.5k
views
motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
4.8 years ago
Chris Seidel
▴ 80
0
votes
0
replies
1.4k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
6.8 years ago
camerond
• 0
2
votes
5
replies
3.4k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 7.6 years ago by
Valerie Obenchain
★ 6.8k • written 7.6 years ago by
svlachavas
▴ 840
0
votes
0
replies
1.3k
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
8.2 years ago
priyankaraina10
• 0
0
votes
2
replies
1.6k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 10.3 years ago by
Simon Coetzee
▴ 50 • written 10.3 years ago by
ashley.doane
▴ 20
6 results • Page
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Comment: msmsTests, inconsistent sign between lFC.Av and LogFC
by
Ben
• 0
Continued here due to posting difficulties: Extract from the results table: ``` Inhibitor Vehicle lFC.Av LogFC ... F1 0.0 27…
Answer: DESeq2 for 16S rRNA Analysis
by
James W. MacDonald
68k
The Wald test is only meant for comparison of two groups at a time, so it depends on what you mean by 'analyze across multiple groups at a …
Comment: MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list'
by
varying.mastodon.isyn
• 0
Oh, that error! I remember wrestling with that one for hours when I was first learning Python. Turns out I was trying to use a list itself …
Comment: Confirm that OpenStats will not be archived (pryr dependency)
by
Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
by
ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Votes
Answer: How to directly decet the outlier samples (libraries) in EdgeR pipeline
Answer: Confused about the CPM and TMM normalization in edgeR
A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
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