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motifbreakr
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Is there a function that takes an amino acid string and returns all biologically possible substitutions?
Biostrings
aminoacid
motifbreakR
written 16 months ago by
wilson_ava
• 0
0
votes
0
replies
1.5k
views
motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
4.7 years ago
Chris Seidel
▴ 80
0
votes
0
replies
1.3k
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
6.7 years ago
camerond
• 0
2
votes
5
replies
3.4k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 7.5 years ago by
Valerie Obenchain
★ 6.8k • written 7.6 years ago by
svlachavas
▴ 840
0
votes
0
replies
1.2k
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
8.1 years ago
priyankaraina10
• 0
0
votes
2
replies
1.6k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 10.2 years ago by
Simon Coetzee
▴ 50 • written 10.2 years ago by
ashley.doane
▴ 20
6 results • Page
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Comment: Ensembl plants at annotationHub?
by
Guido Hooiveld
★ 4.1k
Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…
Comment: How does contrasts.fit do in limma to extract comparisons with a model having in
by
jtsy6383
• 0
Thanks for the reminder about DiffVar (for that project I ended up using GAMLSS in the end and haven't touched DiffVar since) and the alter…
Comment: Ensembl plants at annotationHub?
by
jwp48
• 0
Dear Johannes, Would it be possible to generate a EnsDb for the newest Medicago V5 genome release? Medicago truncatula A17 r5.0 This woul…
Answer: please provide a BibTeX citation for "Advanced Single-Cell Analysis with Biocond
by
Ludwig Geistlinger
▴ 80
When referring to the OSCA book including individual sub-books please cite the OSCA paper: Amezquita, R.A., Lun, A.T.L., Becht, E. et a…
Comment: please provide a BibTeX citation for "Advanced Single-Cell Analysis with Biocond
by
Sean Davis
21k
Just FYI, I added a github issue to track: https://github.com/OSCA-source/OSCA.advanced/issues/27
Votes
A: how to control age and gender effect in expression data using DESeq2
limma moderated t-statistics and B-statistics
A: how to control age and gender effect in expression data using DESeq2
how to control age and gender effect in expression data using DESeq2
Answer: please provide a BibTeX citation for "Advanced Single-Cell Analysis with Biocond
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