Bioconductor Msmstests

Showing : msmstests • reset

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8

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proteomics MSnbase MSnSet readMSnSet msmsTests

updated 6.3 years ago by sutturka • 0 • written 7.9 years ago by moldach ▴ 20

4

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5

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msnbase msmstests proteomics lc-ms/ms msnID

updated 6.8 years ago by Laurent Gatto 1.6k • written 6.8 years ago by fgol ▴ 10

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12

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Proteomics msmstests FDR

updated 7.2 years ago by Laurent Gatto 1.6k • written 7.2 years ago by laural710 • 0

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Comment: Bioinformatician at the Lausanne University Hospital by eja.ger.m • 0

For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

BTW, I tested with no issue on MacOS ARM on our previous github issue.

Votes

C: DESeq2 Following RSEM

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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