Bioconductor Multiplealignment

Showing : multiplealignment • reset

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multiplealignment genome

6.3 years ago Giuseppe ▴ 20

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msaprettyprint() msa multiplealignment export

updated 6.9 years ago by UBod ▴ 300 • written 6.9 years ago by Assa Yeroslaviz ★ 1.5k

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multiplealignment decipher

7.2 years ago c.l.frankling • 0

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msa Biostrings MultipleAlignment

updated 7.3 years ago by UBod ▴ 300 • written 7.3 years ago by Christof Winter ▴ 10

4 results • Page 1 of 1

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Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0

Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…

Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0

EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…

Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0

@[sandtrix][1] This is useful information. [1]: https://sandtrix.io

Votes

A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

Awards • All

Teacher to dsull ▴ 40