Biostar Multiplealignment

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msaprettyprint() msa multiplealignment export

updated 5.2 years ago by UBodenhofer ▴ 290 • written 5.2 years ago by Assa Yeroslaviz ★ 1.5k

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msa Biostrings MultipleAlignment

updated 5.5 years ago by UBodenhofer ▴ 290 • written 5.5 years ago by Christof Winter ▴ 10

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multiplealignment decipher

5.5 years ago c.l.frankling • 0

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multiplealignment genome

4.5 years ago Giuseppe ▴ 20

4 results • Page 1 of 1

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Comment: how can I do gene differential analysis on data after vst by linouhao ▴ 20

Thanks a lot. so do you know when professor Gordon Smyth says 'Differential expression analysis of vst values can be performed by limma-t…

Comment: Help with Error in DiffBind by Rory Stark ★ 4.7k

Apologies. The first line should be result <- dba(sampleSheet=samples) I've gone back and edited previous replies to reflect this.

Answer: *** caught segfault *** , cause 'memory not mapped' by James W. MacDonald 62k

You are unfortunately running out of RAM. As you note, you could possibly use `frma`, after generating frozen vectors using the `frmaTools`…

Comment: Help with Error in DiffBind by Chris • 0

Thanks Rory! result <- dba(samples) Error in if ((length(callers) == 1) & (callers[1] == "counts")) { : argument is of len…

Answer: Help with Error in DiffBind by Rory Stark ★ 4.7k

In your case, with only two replicates in each sample group, you can not perform a default analysis using only `dba.analyze()`. I suggest t…

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Analyzing RNA-seq data by WGCNA

A: Analyzing RNA-seq data by WGCNA

Comment: Help with Error in DiffBind

WGCNA: Module preservation vs consensus analysis

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Supporter to linouhao ▴ 20