Biostar Multiplealignment

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msaprettyprint() msa multiplealignment export

updated 5.2 years ago by UBodenhofer ▴ 290 • written 5.2 years ago by Assa Yeroslaviz ★ 1.5k

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msa Biostrings MultipleAlignment

updated 5.5 years ago by UBodenhofer ▴ 290 • written 5.5 years ago by Christof Winter ▴ 10

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multiplealignment decipher

5.5 years ago c.l.frankling • 0

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multiplealignment genome

4.5 years ago Giuseppe ▴ 20

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Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by tahir.msajid • 0

Hi Rory, I came up with another question while analyzing my data. A scenario of analysis: Path to bam files, path to peaks files (broad pe…

Comment: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R by Yang Shi ▴ 10

Thanks for your reply sir! Here is the data ([EBPlusPlusAdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.tsv][1]). And there is the data process…

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va by davidhillis • 0

Thank you!

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

Thank you Gordon for your time and patience, I'd try to be more specific. I've read carefully the three first chapters of `edgeR` user guid…

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va by James W. MacDonald 62k

This works for me. ``` > library(VariantAnnotation) > library(TxDb.Hsapiens.UCSC.hg19.knownGene) > txdb <- TxDb.Hsapiens.UCSC.hg19.knownGe…

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Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

A: Pathway analysis of differentially methylated CpGs

Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

Answer: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va

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