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Showing :
no replicates
•
reset
0
votes
0
replies
1.1k
views
MethylSig is not giving DMRs with no replicates
methylsig
no replicates
dmr
7.4 years ago
nilaycan
• 0
1
vote
5
replies
3.9k
views
steps to get up and down regulated genes using DESeq2
deseq2
without replicate
no replicates
updated 7.6 years ago by
Michael Love
43k • written 7.6 years ago by
Tony
• 0
4
votes
9
replies
12k
views
DESeq2, no replicate
deseq2
no replicates
high p-adj values
updated 3.4 years ago by
Michael Love
43k • written 8.2 years ago by
Mahtetie
• 0
4
votes
8
replies
2.8k
views
Advice regarding RNAseq data with no replicates, best approach to accomplish fold-change
rnaseq
edger
DGE
no replicates
8.4 years ago
Stefany Solano
• 0
2
votes
1
reply
1.7k
views
diffHiC with no biological replicates?
diffhic
estimate dispersion value
glm
no replicates
deseq
updated 8.8 years ago by
Aaron Lun
★ 29k • written 8.8 years ago by
hwick1
▴ 20
5
votes
7
replies
5.7k
views
Differential binding of ATAC-seq data with no replicates
ATAC
differential binding analysis
no replicates
DEseq2
chromatin
8.8 years ago
BioinfGuru
▴ 70
6 results • Page
1 of 1
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Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Answer: wgcna module preseravtion taking too long?
by
ATpoint
★ 5.0k
WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…
Votes
Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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