Biostar Without replicate

Showing : without replicate • reset

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355

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bsmooth without replicate dimension

4.1 years ago nilaycan • 0

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566

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deseq2 time-series without replicate

updated 4.1 years ago by Michael Love 37k • written 4.1 years ago by bahlv • 0

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1.6k

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deseq2 without replicate no replicates

updated 4.2 years ago by Michael Love 37k • written 4.2 years ago by Tony • 0

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2.7k

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diffbind bioconductor differential binding analysis without replicate chipseq

4.7 years ago Hesh • 0

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1.5k

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limma edger timecourse without replicate voom

5.7 years ago Camila Orellana ▴ 10

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1.9k

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edger differential gene expression without replicate nested design help

updated 6.1 years ago by Aaron Lun ★ 27k • written 6.1 years ago by knipehf • 0

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748

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edgeR differential expression without replicate

6.1 years ago gavin.oliver • 0

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1.1k

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diffbind without replicate

updated 6.4 years ago by Gord Brown ▴ 640 • written 6.4 years ago by yiweihe • 0

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2.0k

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edger without replicate

updated 6.6 years ago by Yunshun Chen ▴ 770 • written 6.6 years ago by Sushant Pawar • 0

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1.1k

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edger without replicate

updated 6.6 years ago by Aaron Lun ★ 27k • written 6.6 years ago by Sushant Pawar • 0

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3.3k

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without Replicate deseq2

updated 13 months ago by Michael Love 37k • written 6.7 years ago by Sushant Pawar • 0

11 results • Page 1 of 1

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Comment: Data input for aracne2regulon function in viper package by xlal • 0

You are right!And may be we should check the gene symbols cause when I open the expression matrix in EXCEL,it will change some genes into m…

Comment: unable to install.packages("spatialLIBD") by Leonardo Collado Torres ▴ 1000

All the solutions Lori proposed are valid. The `STexampleData` package I think has only 1 of our samples (see https://bioconductor.org/pack…

Answer: how to use Rsamtools to parse extra fields from STAR alignment by Martin Morgan 25k

The 'extra columns' are called 'tags' in the SAM specification. Following the documentation `?ScanBamParam` you should add `tag = "NH"`. Se…

Comment: DEXSeq: Error in reading counts from htseq "Error in FUN(X[[i]], ...) : subscrip by Delta._.43 ▴ 10

Yes, indeed it is the same error. Here are the first few lines of my count file. ``` "ENSG00000000003":"001" 0 "ENSG00000000003":"002" 1032…

Comment: DEXSeq: Error in reading counts from htseq "Error in FUN(X[[i]], ...) : subscrip by Alejandro Reyes ★ 1.8k

Thanks for your detail post. I think this might be related to this issue here: https://support.bioconductor.org/p/9143537/ Just to verify…

Votes

Answer: spot- vs cell-level data access

Answer: unable to install.packages("spatialLIBD")

Comment: unable to install.packages("spatialLIBD")

error running UniProt.ws

Answer: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU

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Popular Question to Alejandro Reyes ★ 1.8k

Popular Question to Leonardo Collado Torres ▴ 1000

Scholar to ATpoint ★ 1.4k

Scholar to voogd.o ▴ 10