Showing : without replicate • reset
0
votes
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241
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BSmooth does give DMRs without no replicate data sets
bsmooth without replicate dimension
2.9 years ago nilaycan • 0
0
votes
3
replies
404
views
time-series, no replicates, no control groupe
deseq2 time-series without replicate
updated 2.9 years ago by 33k • written 2.9 years ago by • 0
1
vote
5
replies
828
views
steps to get up and down regulated genes using DESeq2
deseq2 without replicate no replicates
updated 3.1 years ago by 33k • written 3.1 years ago by • 0
2
votes
6
replies
2.0k
views
Analyzing data without replicates using DiffBind
diffbind bioconductor differential binding analysis without replicate chipseq
3.6 years ago Hesh • 0
1
vote
5
replies
1.2k
views
Can I use EdgeR log2(cpm) instead of voom log2(cpm) to be analyzed as microarray data?
limma edger timecourse without replicate voom
4.6 years ago Camila Orellana ▴ 10
4
votes
5
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1.5k
views
edgeR- DE analysis with no replicates
edger differential gene expression without replicate nested design help
updated 5.0 years ago by ★ 26k • written 5.0 years ago by • 0
3
votes
6
replies
621
views
Question about edgeR usage with one case and multiple controls
edgeR differential expression without replicate
5.0 years ago gavin.oliver • 0
0
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3
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901
views
to call differential peaks among 4 peaksets all together using DiffBind
diffbind without replicate
updated 5.2 years ago by ▴ 630 • written 5.2 years ago by • 0
2
votes
7
replies
1.6k
views
edgeR for with no Replicate
edger without replicate
updated 5.5 years ago by ▴ 750 • written 5.5 years ago by • 0
1
vote
1
reply
983
views
edgeR for without Replicate
edger without replicate
updated 5.5 years ago by ★ 26k • written 5.5 years ago by • 0
0
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1
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2.4k
views
DESeq2 analysis without Replicate
without Replicate deseq2
updated 5.5 years ago by 33k • written 5.5 years ago by • 0
11 results • Page 1 of 1
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Comment: How does the empirical Bayes moderation (eBayes) in the limma pipeline work? by Junghoon ▴ 10
That was exactly what I was looking for.
Answer: how to plot multiple RLEs on same plot? by James W. MacDonald 57k
Where did that first plot come from? The code used to make that may be available. Anyway, making a plot like that is, in my experience,…
Answer: How does the empirical Bayes moderation (eBayes) in the limma pipeline work? by James W. MacDonald 57k
`?squeezeVar`
Comment: Problem installing packages including flowWorkspace by shepherl 2.7k
On quick glance, it appears you do not have write access to the library directory in order to update the packages? Was R or these package…
Comment: New annotation package - no response from packages@bioconductor.org by athief ▴ 10
Yes, I am registered and have the watched tags updated. I am not sure if I should be awaiting an email answer for further instructions abou…
Votes
Answer: How does the empirical Bayes moderation (eBayes) in the limma pipeline work?
Answer: How does the empirical Bayes moderation (eBayes) in the limma pipeline work?
Answer: Issue with GSVA using dgCMatrix
A: How can I find the location of a gene based on cytogenetic bands (e.g. 7q31.2)?
How can I find the location of a gene based on cytogenetic bands (e.g. 7q31.2)?
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