Bioconductor Without replicate

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2.2k

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limma edger timecourse without replicate voom

written 6.9 years ago by Camila Orellana ▴ 10

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503

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bsmooth without replicate dimension

5.2 years ago nilaycan • 0

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864

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deseq2 time-series without replicate

updated 5.2 years ago by Michael Love 40k • written 5.2 years ago by bahlv • 0

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2.5k

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deseq2 without replicate no replicates

updated 5.4 years ago by Michael Love 40k • written 5.4 years ago by Tony • 0

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3.8k

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diffbind bioconductor differential binding analysis without replicate chipseq

5.9 years ago Hesh ▴ 10

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2.2k

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edger differential gene expression without replicate nested design help

updated 7.3 years ago by Aaron Lun ★ 28k • written 7.3 years ago by knipehf • 0

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1.0k

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edgeR differential expression without replicate

7.3 years ago gavin.oliver • 0

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1.3k

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diffbind without replicate

updated 7.5 years ago by Gord Brown ▴ 650 • written 7.5 years ago by yiweihe • 0

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2.5k

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edger without replicate

updated 7.8 years ago by Yunshun Chen ▴ 810 • written 7.8 years ago by Sushant Pawar • 0

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1.4k

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edger without replicate

updated 7.8 years ago by Aaron Lun ★ 28k • written 7.8 years ago by Sushant Pawar • 0

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4.2k

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without Replicate deseq2

updated 2.2 years ago by Michael Love 40k • written 7.8 years ago by Sushant Pawar • 0

11 results • Page 1 of 1

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Answer: Gviz: UcscTrack and "GC Percent" information by Daniel E. Weeks ▴ 20

**Answer** In https://github.com/ivanek/Gviz/issues/71 an update that fixes this issue was documented - there it is stated that "…

Comment: Biostrings error at retrieving protein sequences by James W. MacDonald 63k

It depends on what kind of whitespace it is. If the whitespace is just a space, then it will work. But if it's a tab, it won't. ``` > gsub…

Comment: Biostrings error at retrieving protein sequences by nromerov • 0

If i write it like ```r gsub(" .*", "", names(protein_sequences)) ``` it will delet all the extra information if it is on the AAString…

Comment: bug in block.plsda from mixOmics? by Lluís Revilla Sancho ▴ 720

Oh, sorry for the noise, I see that just after Bioconductor 3.16 the bug is fixed in both 3.17 and in devel. Thanks for checking.

Answer: Mixed up sample info with plotPCA by Michael Love 40k

I can already tell there is code you aren't showing. For example, your `pcaData` has a variable 'group' that isn't in the previous sample i…

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Answer: Mouse to Human Genes using bioconductor

Mouse to Human Genes using bioconductor

Answer: Biostrings error at retrieving protein sequences

Answer: How do I merge a list of GRanges?

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Popular Question to Daniel E. Weeks ▴ 20

Popular Question to Guido Hooiveld ★ 3.7k