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Showing :
peaks
•
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0
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1.1k
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FindOverlaps, makeVennDiagram and "others"
ATACSeq
peaks
ATAC
ChIPpeakAnno
19 months ago
Raghad
• 0
0
votes
0
replies
1.2k
views
Are broad/narrow peak comparable?
Peaks
MAC2
DiffBind
4.5 years ago
Yuan Tian
▴ 290
0
votes
4
replies
1.5k
views
nucleR ERROR unable to find an inherited method for function peakDetection for signature
nucleosome
peaks
error
Job
updated 6.1 years ago by
James W. MacDonald
68k • written 6.1 years ago by
anne.kannengiesser
• 0
2
votes
3
replies
3.7k
views
Counting reads in fixed width peaks with DiffBind::dba.count without re-centering?
diffbind
chipseq
counts
peaks
bedtools
updated 4.7 years ago by
Rory Stark
★ 5.2k • written 7.7 years ago by
Ni-Ar
▴ 10
3
votes
3
replies
5.3k
views
Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
diffbind
chipseq
peaks
dba
is.na
7.7 years ago
maria.kondili
▴ 10
1
vote
1
reply
1.9k
views
How do I know which peak to analyze?
bioconductor
annotation
peaks
updated 8.1 years ago by
Sean Davis
21k • written 8.1 years ago by
schaud24
▴ 10
6 results • Page
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Comment: How to do differential expresion across time serise with edgeR?
by
Gordon Smyth
53k
If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis. Regarding tutoria…
Comment: How to do differential expresion across time serise with edgeR?
by
petergrahamclark
▴ 10
The use case is kinetic model parameterisation. I'm actually a systems biologist not a bioinformatician. (which is why I'm struggling here)…
Comment: Opportunity to host EuroBioC2026 Preconference workshops!
by
TikTsokaasocissalpc
• 0
Just like attending workshops helps you improve skills in a field, playing 8 Ball Pool helps sharpen your strategy and precision. You can d…
Comment: Upcoming Ensembl API and data access changes - new blog post available
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TikTsokaasocissalpc
• 0
Thanks for sharing this update. Clear migration timelines and documentation are essential for learners and researchers alike. In healthcare…
Comment: ATACseq rudimentary questions
by
4747
• 0
Thank you so much for being detailed, all makes sense now
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