Bioconductor Quasr error

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QuasR Error

8.3 years ago tarek.mohamed ▴ 10

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quasr error

updated 8.3 years ago by Hotz, Hans-Rudolf ▴ 400 • written 8.3 years ago by tarek.mohamed ▴ 10

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quasr quasr error

7.2 years ago jlncrnt ▴ 10

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quasr error

updated 8.3 years ago by Martin Morgan 25k • written 8.3 years ago by maedakus ▴ 10

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quasr error

8.3 years ago Paul Ríos • 0

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quasR quasr error alignmentparameters quasr

5.4 years ago Amer Ghalawinji • 0

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quasr error

updated 8.2 years ago by Hotz, Hans-Rudolf ▴ 400 • written 8.2 years ago by ezgi_can00 • 0

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quasr quasr error paired-end reads rnaseq

7.3 years ago guillaume.dachy • 0

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QuasR qQCReport QuasR error Error in .normarg_totalsize(totalsize)

4.3 years ago A.Singh • 0

9 results • Page 1 of 1

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Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k

> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…

Comment: Differences in differential analysis methods for RNA-Seq by james.zhang20 • 0

Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…

Comment: Deseq2 and Normalization of RNA sequencing data by ATpoint ★ 4.1k

There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …

Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k

MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…

Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position) by Yveto • 0

Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…

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A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

SPIA plotP giving error

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