Showing : r update • reset
0
votes
4
replies
2.5k
views
Biocgenerics updating problem on ubuntu 17.10
bioconductor biocgenerics ubuntu package updates r update
7.1 years ago siinemselvi • 0
3
votes
3
replies
3.7k
views
problem reinstalling Bioconductor package 'clusterProfiler' after updating R to 3.4.0
clusterprofiler package installation r update
updated 7.6 years ago by ▴ 10 • written 7.6 years ago by ▴ 10
2
votes
1
reply
4.7k
views
Upgrade to Bioconductor 3.4 - problems with R
r update upgrade bioclite
updated 8.1 years ago by 67k • written 8.1 years ago by • 0
0
votes
2
replies
1.9k
views
package ‘virtualArray’ is not available (for R version 3.2.1)
r update
updated 9.4 years ago by 25k • written 9.4 years ago by • 0
3
votes
11
replies
6.6k
views
Problems getting Bioc 3.1 after upgrade to R_3.2.0
biocinstaller r update
9.7 years ago meeta.mistry ▴ 30
3
votes
11
replies
15k
views
Problems updating Bioconductor with R 3.2.0
upgrade r update
updated 9.7 years ago by ★ 8.2k • written 9.7 years ago by ▴ 10
2
votes
2
replies
2.1k
views
R 3.1.1 - Update error
R update
updated 10.1 years ago by 67k • written 10.1 years ago by ▴ 10
7 results • Page 1 of 1
Recent ...
Replies
Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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Scholar to James W. MacDonald 67k
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