Bioconductor Rcy3

Showing : rcy3 • reset

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RCy3

6 days ago • updated 1 day ago Matthew Thornton ▴ 360

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317

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RCy3 Cytohubba

updated 4 months ago by alex.pico ▴ 20 • written 4 months ago by jzhan067 ▴ 10

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286

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Cytoscape RCy3 RCy

updated 4 months ago by alex.pico ▴ 20 • written 4 months ago by David R ▴ 90

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861

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Network RCy3

updated 4 months ago by alex.pico ▴ 20 • written 5 months ago by David R ▴ 90

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1.2k

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Cytoscape RCy3 Networkvisualization WGCNA

12 months ago Ortega-C ▴ 10

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619

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RCy3

updated 16 months ago by alex.pico ▴ 20 • written 16 months ago by adR ▴ 30

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1.3k

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GEOquery CancerData limma RCy3 CancerInSilico

updated 2.5 years ago by Steve Lianoglou ★ 13k • written 2.5 years ago by Caitlin ▴ 50

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1.3k

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Cytoscape Pathways Wikipathways rWikiPathways RCy3

3.4 years ago Emilia ▴ 30

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751

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RCy3 Cytoscape R Newick Bioconductor

updated 3.4 years ago by alex.pico ▴ 20 • written 3.8 years ago by ellisjc • 0

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883

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rcy3

updated 3.4 years ago by alex.pico ▴ 20 • written 4.4 years ago by hanna226613 ▴ 10

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1.4k

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RCy3 Cytoscape Rgraphviz GOstats

5.0 years ago Matthew Thornton ▴ 360

11 results • Page 1 of 1

Recent ...

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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180