Bioconductor Rcytoscape

Showing : rcytoscape • reset

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4.8k

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rcytoscape r network graphBAM object

updated 8.4 years ago by Dan Tenenbaum ★ 8.2k • written 8.4 years ago by alptaciroglu ▴ 50

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rcytoscape

updated 8.9 years ago by Dan Tenenbaum ★ 8.2k • written 8.9 years ago by Robert M. Flight ▴ 280

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WGCNA rcytoscape network analysis

updated 7.9 years ago by Paul Shannon ▴ 470 • written 7.9 years ago by christopher.clarskon15 ▴ 20

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wgcna rcytoscape

updated 7.8 years ago by branislav misovic ▴ 120 • written 7.8 years ago by christopher.clarskon15 ▴ 20

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rcytoscape

updated 8.8 years ago by pshannon ▴ 100 • written 8.8 years ago by vmanem ▴ 10

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software error rcytoscape xml

updated 9.4 years ago by drsuuzzz • 0 • written 9.5 years ago by alessandro brozzi ▴ 120

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1.1k

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RCytoscape RCytoscape

11.4 years ago Paul Shannon ▴ 750

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Network charm RCytoscape Network charm RCytoscape

11.4 years ago Paul Shannon ▴ 750

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SNP Coverage Network Cancer TranscriptDb IRanges RCytoscape ggbio Gviz SNP Coverage

updated 12.0 years ago by Tim Triche ★ 4.2k • written 12.0 years ago by Ekta Jain ▴ 370

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SystemsBiology Network RCytoscape SystemsBiology Network RCytoscape

10.3 years ago Paul Shannon ▴ 750

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graph RCytoscape graph RCytoscape

updated 10.3 years ago by Paul Shannon ▴ 470 • written 10.3 years ago by Christopher T Gregg ▴ 210

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graph RCytoscape graph RCytoscape

updated 13.5 years ago by Paul Shannon ★ 1.1k • written 13.5 years ago by Chad Burrus ▴ 20

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838

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RCytoscape RCytoscape

13.0 years ago Paul Shannon ★ 1.1k

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graph RCytoscape graph RCytoscape

12.1 years ago Burak Kutlu ▴ 140

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RCytoscape RCytoscape

12.0 years ago Eleonora Lusito ▴ 10

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GO GLAD RCytoscape GO GLAD RCytoscape

12.0 years ago Paul Shannon ▴ 750

16 results • Page 1 of 1

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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0