Bioconductor Repeated measures

Showing : repeated measures • reset

votes

replies

2.4k

views

dream variancePartition limma differential expression repeated measures

updated 4.6 years ago by Gordon Smyth 50k • written 4.6 years ago by hermidalc ▴ 20

votes

replies

5.0k

views

LIMMA FACTORIAL REPEATED MEASURES differential gene expression

8.7 years ago • updated 8.5 years ago robert.maughan • 0

votes

replies

2.1k

views

limma rna-seq mixed model repeated measures

updated 5.6 years ago by Gordon Smyth 50k • written 5.6 years ago by mikhael.manurung ▴ 270

votes

replies

1.4k

views

SVA deseq2 repeated measures

updated 4.6 years ago by Robert Castelo ★ 3.3k • written 4.6 years ago by sara.blocquiaux • 0

votes

replies

583

views

deseq2 repeated measures

updated 4.4 years ago by Michael Love 41k • written 4.4 years ago by jperin • 0

vote

replies

838

views

deseq2 rnaseq repeated measures time series design formula

updated 4.3 years ago by Michael Love 41k • written 4.3 years ago by Dorien ▴ 10

votes

replies

1.6k

views

edgeR rnaseq repeated measures

updated 6.1 years ago by Ryan C. Thompson ★ 7.9k • written 6.1 years ago by wjh180 • 0

votes

3.9k

views

deseq2 repeated measures time course

updated 6.3 years ago by Michael Love 41k • written 6.3 years ago by Marion • 0

votes

replies

848

views

repeated measures

8.5 years ago PJ • 0

9 results • Page 1 of 1

Recent ...

Replies

Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k

In that case both time and treatment are identical things, so choose one and go with it.

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

numbers 1 to 3 represent observations and/or replicates Control is control. The three controls are shown as Control_1, control_2 and Contr…

Answer: Once again a "Model matrix not full rank" by James W. MacDonald 65k

The time and treatment are essentially the same thing, so you cannot have both in the model at the same time. Do the numbers 1:3 represent …

Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Votes

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

Awards • All

Popular Question to gene_bioconductor ▴ 10

Popular Question to rohitsatyam102 ▴ 20