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reproducibility
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DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent version changes
deseq2
new version
bioconductor
software error
reproducibility
7.5 years ago
Daniel Elsner
• 0
0
votes
3
replies
2.2k
views
Locating older version of Bioconductor packages
reproducibility
archive
source code
updated 8.6 years ago by
Dan Tenenbaum
★ 8.2k • written 8.6 years ago by
brucbruc
• 0
1
vote
2
replies
1.4k
views
Package archive for the purpose of reproducible research
archive
reproducibility
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
robert.bruccoleri
▴ 10
0
votes
16
replies
2.5k
views
Variance between runs of Rsubread
rsubread
alignment
reproducibility
7.6 years ago
Isaac Virshup
• 0
3
votes
2
replies
788
views
Does a specific bioconductor version constrain versions of non-bioconductor packages?
reproducibility
versions
installing
base-r
updated 4.2 years ago by
Mike Smith
★ 6.5k • written 4.2 years ago by
Yannick Wurm
▴ 40
0
votes
0
replies
795
views
Which tools should we use to make research reproducible?
bioconductor
R
reproducibility
7.5 years ago
lwumd1400
• 0
2
votes
4
replies
1.8k
views
no date tag included in docker ps output
docker
reproducibility
8.6 years ago
anton.kratz
▴ 60
7 results • Page
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Comment: Memory errors using read.bismark?
by
Juan Higareda
• 0
Thanks a lot Peter, We solved the problem, IT had implemented a policy of RAM usage that started a conflict with any RAM-hungry process, m…
Answer: meffil.snp.concordance
by
James W. MacDonald
65k
This support site is meant to help people with technical questions about Bioconductor packages. The `meffil` package is not Bioconductor, n…
Answer: minfi latest update for EPIC V2 chip
by
James W. MacDonald
65k
Zuguang Gu submitted both of those packages as part of the current release, and I submitted a PR for `minfi` so it will now distinguish the…
Answer: Recovering my account credentials on Bioconductor
by
shepherl
3.9k
As we will need to exchange some information can you please contact me at bioconductorcoreteam@gmail.com and I can better assist you. Che…
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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