Bioconductor Rory stark

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diffbind chipseq atac-seq rory stark

updated 6.1 years ago by Rory Stark ★ 4.8k • written 6.2 years ago by andrew.gehrke • 0

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diffbind rory stark

5.8 years ago andrew.gehrke • 0

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1.6k

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Rory Stark diffbind TMM edgeR chipseq

updated 6.9 years ago by Rory Stark ★ 4.8k • written 7.1 years ago by akdess • 0

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CHIPQC Diffbind chipseq rory stark Thomas Carroll

updated 9 months ago by arisarkar88 ▴ 40 • written 3.1 years ago by bioinfouser2 ▴ 10

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rory stark

6.4 years ago • updated 6.0 years ago mforoo1 • 0

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diffbind rory stark chip seq

updated 2.6 years ago by Rory Stark ★ 4.8k • written 3.1 years ago by bioinfouser2 ▴ 10

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545

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diffbind Rory Stark coordinate

updated 3.2 years ago by Rory Stark ★ 4.8k • written 3.3 years ago by Guandong Shang ▴ 40

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Comment: Proteomics data with NA values by ATpoint ★ 2.8k

NAs are common in proteomics data and a common strategy is to impute them, see for example the `DEP` package here at Bioconductor which dis…

Answer: Proteomics data with NA values by Laurent Gatto 1.6k

- First, you need to assess how many missing values you have. - I would recommend not to impute your data by 0 (or any arbitrary small …

Answer: Question on constructing design matrix and defining contrasts for analysis by Gordon Smyth 47k

Sorry, I am not able to follow your question. I don't understand the design of your experiment -- you would need to provide the targets fra…

Answer: European Bioconductor Conference 2023 planning by noteminnow • 0

Great. I will join it. [baldi's basics][1] [1]: https://baldisbasics.io

Comment: BiocGenerics binary is outdated for macOS ARM by Michael Steinbaugh ▴ 90

Awesome thanks, for reference here's the lock issue: ``` ############################################################################## ##…

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Visualization of negative log CPM values

A: Difference between heatmap using Euclidian distance and Poisson distance

Comment: BiocGenerics binary is outdated for macOS ARM

flowCore: using read.FCS with which.lines is not time efficient?

Comment: BiocGenerics binary is outdated for macOS ARM

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