Bioconductor Subjunc

Showing : subjunc • reset

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1.6k

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subjunc data.frame myExons Rsubread

updated 2.6 years ago by ATpoint ★ 5.0k • written 2.6 years ago by Sukeerthi • 0

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3.4k

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subjunc edgeR

4.1 years ago • updated 4.0 years ago Assa Yeroslaviz ★ 1.5k

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3.8k

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SubRead Align Subjunc

updated 5.6 years ago by James W. MacDonald 68k • written 5.6 years ago by abano • 0

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1.9k

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rsubread subjunc

updated 10.5 years ago by Wei Shi ★ 3.6k • written 10.5 years ago by Stephen Piccolo ▴ 600

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1.8k

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rsubread subjunc rnaseq fusion genes

updated 10.6 years ago by Wei Shi ★ 3.6k • written 10.6 years ago by misic • 0

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3.7k

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seqc rsubread featurecounts subjunc ercc News

11.2 years ago Wei Shi ★ 3.6k

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1.7k

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rnaseq subjunc indel

updated 11.2 years ago by Wei Shi ★ 3.6k • written 11.3 years ago by daniel.silvestre ▴ 100

7 results • Page 1 of 1

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Answer: Bulk RNAseq analysis for by James W. MacDonald 68k

In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…

Comment: Jobs at Ensembl by frostybuddyy • 0

I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…

Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k