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sushi
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Plotting bed8 with Sushi possible?
sushi
bed
7.1 years ago
maltethodberg
▴ 180
0
votes
0
replies
948
views
plotGenes command Sushi
sushi
plotGenes
7.8 years ago
portia.mcghan
• 0
1
vote
0
replies
1.2k
views
Issues with Sushi manhattanPlot function, cannot plot p-values
sushi
9.1 years ago
snamjoshi87
▴ 40
0
votes
1
reply
1.5k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
9.6 years ago • updated 9.5 years ago
waqasnayab
• 0
1
vote
1
reply
1.5k
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Adding legends to sushi plots produced using plotBed function
sushi
plotBed
updated 9.6 years ago by
dphansti
▴ 10 • written 9.8 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
1
reply
1.2k
views
Sushi example data not correct?
Sushi
updated 9.6 years ago by
dphansti
▴ 10 • written 9.6 years ago by
Till
▴ 30
0
votes
3
replies
2.5k
views
Plotting gene region using Sushi
R
sushi
updated 9.8 years ago by
dphansti
▴ 10 • written 9.8 years ago by
javier.mendoza
• 0
0
votes
2
replies
2.0k
views
ploting HiC data with Sushi
sushi
updated 10.2 years ago by
Steve Lianoglou
★ 13k • written 10.2 years ago by
Bogdan
▴ 670
8 results • Page
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Comment: Save the Date for EuroBioC2026 in Turku!
by
jamesbennettki
• 0
That sounds amazing I have always wanted to visit Finland and meet others in the Bioconductor community Events like EuroBioC2026 inspire me…
Answer: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
This should now be resolved
Answer: Question about collapsing ASVs by genus level during DESeq2 analysis
by
Michael Love
43k
I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…
Answer: Integration: Paired-end vs healthy single-end from a different source
by
James W. MacDonald
68k
If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
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Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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