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sushi
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0
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790
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Plotting bed8 with Sushi possible?
sushi
bed
5.6 years ago
maltethodberg
▴ 180
0
votes
0
replies
731
views
plotGenes command Sushi
sushi
plotGenes
6.3 years ago
portia.mcghan
• 0
1
vote
0
replies
985
views
Issues with Sushi manhattanPlot function, cannot plot p-values
sushi
7.6 years ago
snamjoshi87
▴ 40
0
votes
1
reply
1.1k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.1 years ago
waqasnayab
• 0
0
votes
1
reply
972
views
Sushi example data not correct?
Sushi
updated 8.1 years ago by
dphansti
▴ 10 • written 8.1 years ago by
Till
▴ 30
1
vote
1
reply
1.1k
views
Adding legends to sushi plots produced using plotBed function
sushi
plotBed
updated 8.1 years ago by
dphansti
▴ 10 • written 8.3 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
3
replies
2.0k
views
Plotting gene region using Sushi
R
sushi
updated 8.3 years ago by
dphansti
▴ 10 • written 8.3 years ago by
javier.mendoza
• 0
0
votes
2
replies
1.6k
views
ploting HiC data with Sushi
sushi
updated 8.7 years ago by
Steve Lianoglou
★ 13k • written 8.7 years ago by
Bogdan
▴ 670
8 results • Page
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Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Answer: Differential gene expression analysis results
by
ATpoint
★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Votes
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Comment: deseq2 results
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