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sushi
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Plotting bed8 with Sushi possible?
sushi
bed
7.4 years ago
maltethodberg
▴ 180
0
votes
0
replies
998
views
plotGenes command Sushi
sushi
plotGenes
8.1 years ago
portia.mcghan
• 0
1
vote
0
replies
1.3k
views
Issues with Sushi manhattanPlot function, cannot plot p-values
sushi
9.4 years ago
snamjoshi87
▴ 40
0
votes
1
reply
1.7k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
9.8 years ago
waqasnayab
• 0
1
vote
1
reply
1.5k
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Adding legends to sushi plots produced using plotBed function
sushi
plotBed
updated 9.9 years ago by
dphansti
▴ 10 • written 10.0 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
1
reply
1.3k
views
Sushi example data not correct?
Sushi
updated 9.9 years ago by
dphansti
▴ 10 • written 9.9 years ago by
Till
▴ 30
0
votes
3
replies
2.7k
views
Plotting gene region using Sushi
R
sushi
updated 10.0 years ago by
dphansti
▴ 10 • written 10.0 years ago by
javier.mendoza
• 0
0
votes
2
replies
2.1k
views
ploting HiC data with Sushi
sushi
updated 10.4 years ago by
Steve Lianoglou
★ 13k • written 10.4 years ago by
Bogdan
▴ 670
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Answer: Bulk RNAseq analysis for
by
Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo
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a2a2haa
• 0
By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…
Answer: Bulk RNAseq analysis for
by
James W. MacDonald
68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
Comment: Jobs at Ensembl
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frostybuddyy
• 0
I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics
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mudasarnaeem2020
• 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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