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error lazy R biomaRt table

updated 12 months ago by juo5 • 0 • written 17 months ago by Abhishek ▴ 20

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2

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cn.mops log normalized counts table

updated 7.7 years ago by Günter Klambauer ▴ 540 • written 7.7 years ago by falk.zakrzewski • 0

0

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1

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1.6k

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rle normalization table

updated 9.5 years ago by Steve Lianoglou ★ 13k • written 9.5 years ago by aiko • 0

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Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks by Luca • 0

Sorry for reviving this 1 month later, but I was reading about size factor estimation, and just wanted to add my findings if anyone stumble…

Comment: DiffBind can't find a DAR by ATpoint ★ 4.8k

"My cake does not look as advertised in the recipe", with this sloppy sentence I hope you understand that you need to give people details, …

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Follow up question, is this the correct way to extract results? ```r results <- results(ddsObj, list(c("GroupControl.Followup", "GroupTrea…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Thank you for your reply! I would love to know your thoughts on the plots I've included above. > 'Are the differences between groups lar…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

I also realised that the other gene I pointed out that was flagged as DE but had similar count differences also shows that rep1 is lower th…

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Comment: DESeq - help with pair wise comparisons

Answer: SingleR with multiple single cell references

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