Bioconductor Threshold

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wgcna network bicor threshold

updated 5.1 years ago by Peter Langfelder ★ 3.0k • written 5.1 years ago by Arindam ▴ 80

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PureCN copy-ratio threshold

updated 6.9 years ago by markus.riester ▴ 130 • written 6.9 years ago by twtoal ▴ 10

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wgcna sft picksoftthreshold threshold rnaseq

updated 7.6 years ago by Peter Langfelder ★ 3.0k • written 7.6 years ago by Fabricio Almeida-Silva ▴ 40

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SPIA plotP threshold

8.8 years ago docpriya21 ▴ 10

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Comment: org.Ss.eg.db MAMDC4 maps to incorrect UNIPROT key by thundernight • 0

I'm actually having the same problem. [Spanish dictionary][1] [1]: https://spanishdictionary.cc

Comment: voomLmFit fitted log-CPM values by Gordon Smyth 52k

The fitted values are on the log2CPM scale. I would have told you if they were not! I think you may be getting confused by the differences…

Comment: voomLmFit fitted log-CPM values by Lina ▴ 10

Is the output from fitted(v) in the log2 CPM scale? or CPM scale?

Answer: voomLmFit fitted log-CPM values by Gordon Smyth 52k

Fitted values are obtained from limma MArrayLM objects by ``` fitted(v) ```

Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0

What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…

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Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

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