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time-series
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Time-series RNA-seq analysis using DESeq2
time-series
DESeq2
RNASeq
timecoursedata
TimeCourse
updated 9 months ago by
ATpoint
★ 4.1k • written 9 months ago by
Debebe
• 0
1
vote
4
replies
1.3k
views
Analysis Time course data using DESeq2
deseq2
timecourse
multiple time points
time-series
updated 5.9 years ago by
Michael Love
42k • written 5.9 years ago by
zhangfei-123
• 0
0
votes
3
replies
1.0k
views
time-series, no replicates, no control groupe
deseq2
time-series
without replicate
updated 5.8 years ago by
Michael Love
42k • written 5.8 years ago by
bahlv
• 0
2
votes
10
replies
2.8k
views
Time-series analysis with DESeq2
deseq2
time-series
design matrix
edger
updated 5.2 years ago by
Michael Love
42k • written 5.2 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
5
replies
1.9k
views
RNA-seq time course analysis with only one experimental condition
deseq2
cancer
rna-seq
time-series
4.8 years ago
mah19
• 0
0
votes
1
reply
622
views
Interpreting results from DESeq2 time-series multifactorial data analysis
DESeq2
time-series
timecoursedata
timecourse
multifactorial
updated 17 months ago by
Michael Love
42k • written 18 months ago by
arshad1292
• 0
0
votes
1
reply
828
views
DEseq2 to test half-life for time-series data
half-life
DESeq2
time-series
updated 3.1 years ago by
Michael Love
42k • written 3.1 years ago by
Xianjun Dong
▴ 10
1
vote
5
replies
1.5k
views
Time course DE analysis in DESeq2 with Wald test
DESeq2
time-series
updated 6.6 years ago by
Michael Love
42k • written 6.6 years ago by
gtechbio
▴ 10
0
votes
2
replies
796
views
R: problem with running time-series analysis software: Mfuzz
time-series
mfuzz
replace=FALSE
24 months ago
soda
▴ 80
9 results • Page
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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…
Comment: European Bioconductor Conference 2023 planning
by
angelaesper43
• 0
@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …
Comment: Ensembl plants at annotationHub?
by
Johannes Rainer
★ 2.0k
Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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Johannes Rainer
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Chris
▴ 10
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★ 4.0k
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Michael Love
42k
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Vincent J. Carey, Jr.
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