Bioconductor Timecourse

Showing : timecourse • reset

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2.7k

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limma edger timecourse without replicate voom

written 7.5 years ago by Camila Orellana ▴ 10

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247

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DESeq2 timecourse time

updated 3 months ago by Michael Love 42k • written 3 months ago by Anastasiia • 0

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516

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timecoursedata RNASeqData TimeCourse DESeq2

updated 10 months ago by Michael Love 42k • written 10 months ago by georgii.vdovin • 0

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1.4k

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deseq2 timecourse design and contrast matrix

updated 9 weeks ago by ta_awwad ▴ 10 • written 8.5 years ago by Assa Yeroslaviz ★ 1.5k

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1.4k

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Transcriptomics TimeCourse DESeq2

updated 9 months ago by Michael Love 42k • written 10 months ago by smac97 • 0

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565

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timecourse KEGG DESeq2

updated 11 months ago by Michael Love 42k • written 11 months ago by Fred • 0

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174

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DESeq2 timecourse DifferentialExpression

updated 5 weeks ago by James W. MacDonald 65k • written 5 weeks ago by joshua.mannheimer • 0

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941

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time-series DESeq2 RNASeq timecoursedata TimeCourse

updated 8 months ago by ATpoint ★ 4.1k • written 8 months ago by Debebe • 0

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273

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RNASeq DESeq2 timecourse

4 months ago WS • 0

9 results • Page 1 of 1

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Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

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Comment: Log-cpm values from limma

Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

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