Bioconductor Varianttools

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ubuntu package installation varianttools

updated 9.0 years ago by James W. MacDonald 65k • written 9.0 years ago by lelemraposo • 0

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2.2k

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VariantTools VariantTools

updated 10.8 years ago by Valerie Obenchain ★ 6.8k • written 10.8 years ago by Taylor, Sean D ▴ 250

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2.2k

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IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector

updated 10.5 years ago by Michael Lawrence ★ 11k • written 10.5 years ago by heyi xiao ▴ 360

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2.1k

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VariantTools BiocParallel GenomicAlignments VariantTools BiocParallel GenomicAlignments

updated 9.9 years ago by Martin Morgan 25k • written 9.9 years ago by Guest User ★ 13k

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2.0k

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Coverage VariantTools ensemblVEP Coverage VariantTools ensemblVEP

updated 11.1 years ago by Valerie Obenchain ★ 6.8k • written 11.1 years ago by Guest User ★ 13k

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2.0k

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VariantAnnotation Annotation VariantAnnotation VariantTools VariantAnnotation Annotation

updated 10.4 years ago by Valerie Obenchain ★ 6.8k • written 10.4 years ago by Thomas Girke ★ 1.7k

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1.9k

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varianttools gmapr

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by Johannes Rainer ★ 2.0k

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1.7k

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Coverage Cancer cycle VariantTools Coverage Cancer cycle VariantTools

updated 10.8 years ago by Taylor, Sean D ▴ 250 • written 10.8 years ago by Martin Morgan 25k

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1.6k

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customprodb dbsnp refseq varianttools

updated 8.8 years ago by xiaojing.wang ▴ 50 • written 8.8 years ago by kristenbeck527 • 0

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1.4k

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VariantTools VariantTools

updated 10.7 years ago by Dan Tenenbaum ★ 8.2k • written 10.7 years ago by francesca bergantino ▴ 30

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1.4k

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VariantTools VariantTools

updated 10.5 years ago by Michael Lawrence ★ 11k • written 10.5 years ago by heyi xiao ▴ 360

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1.3k

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VariantTools VariantTools

updated 10.5 years ago by Michael Lawrence ★ 11k • written 10.5 years ago by heyi xiao ▴ 360

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879

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VariantTools

updated 20 months ago by Vincent J. Carey, Jr. 6.7k • written 20 months ago by Imraan • 0

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841

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protein structure determinationh varianttools

updated 6.9 years ago by Hervé Pagès 16k • written 6.9 years ago by amolares • 0

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828

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VariantTools VariantTools

updated 10.9 years ago by Michael Lawrence ★ 11k • written 10.9 years ago by Guest User ★ 13k

15 results • Page 1 of 1

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Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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