Bioconductor Wald

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560

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DESeq2 LRT Wald

updated 3 months ago by James W. MacDonald 67k • written 3 months ago by Eric • 0

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1.2k

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DESeq2 wald stat

updated 2.2 years ago by Peter Hickey ▴ 740 • written 2.2 years ago by eve.olszanowski • 0

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1.8k

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etLRT WALD edgeR DESEq

updated 3.2 years ago by Michael Love 42k • written 3.2 years ago by aiswaryabioinfo • 0

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874

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deseq2 LRT wald

updated 4.7 years ago by Kevin Blighe ★ 4.0k • written 4.7 years ago by jnaviapelaez ▴ 10

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1.2k

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GENESIS zscore wald

updated 5.1 years ago by Stephanie M. Gogarten ▴ 870 • written 5.1 years ago by lassana.a.samarakoon ▴ 10

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2.1k

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deseq2 LRT WALD

updated 5.3 years ago by Michael Love 42k • written 5.3 years ago by annesoalvarez • 0

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1.4k

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deseq2 ribosome profiling wald lrt

updated 5.8 years ago by Michael Love 42k • written 5.8 years ago by indrik.wijaya ▴ 20

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4.3k

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rnaseq deseq2 lrt wald differential gene expression

updated 2.6 years ago by chm • 0 • written 7.2 years ago by chrysanthi.taxiarchi12 • 0

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2.8k

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deseq2 wald lrt genes significance

updated 8.4 years ago by Michael Love 42k • written 8.4 years ago by aziza ▴ 20

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19k

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deseq2 wald

updated 3.0 years ago by Michael Love 42k • written 9.7 years ago by deena ▴ 20

10 results • Page 1 of 1

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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

Votes

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

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