Bioconductor Wald

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957

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DESeq2 wald stat

updated 20 months ago by Peter Hickey ▴ 740 • written 20 months ago by eve.olszanowski • 0

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4.0k

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rnaseq deseq2 lrt wald differential gene expression

updated 2.1 years ago by krushnach80 • 0 • written 6.7 years ago by chrysanthi.taxiarchi12 • 0

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18k

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deseq2 wald

updated 2.5 years ago by Michael Love 42k • written 9.2 years ago by deena ▴ 20

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1.5k

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etLRT WALD edgeR DESEq

updated 2.7 years ago by Michael Love 42k • written 2.7 years ago by aiswaryabioinfo • 0

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709

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deseq2 LRT wald

updated 4.2 years ago by Kevin Blighe ★ 3.9k • written 4.2 years ago by jnaviapelaez ▴ 10

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1.0k

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GENESIS zscore wald

updated 4.6 years ago by Stephanie M. Gogarten ▴ 870 • written 4.6 years ago by lassana.a.samarakoon ▴ 10

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1.9k

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deseq2 LRT WALD

updated 4.8 years ago by Michael Love 42k • written 4.8 years ago by annesoalvarez • 0

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1.2k

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deseq2 ribosome profiling wald lrt

updated 5.3 years ago by Michael Love 42k • written 5.3 years ago by indrik.wijaya ▴ 20

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2.6k

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deseq2 wald lrt genes significance

updated 7.9 years ago by Michael Love 42k • written 7.9 years ago by aziza ▴ 20

9 results • Page 1 of 1

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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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