Showing : widgettools • reset
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ReadAffy widget fails for Annotated DataFrame
Microarray DynDoc tkWidgets affy widgetTools Microarray DynDoc tkWidgets affy widgetTools
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 140
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Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
16.9 years ago Seth Falcon ★ 7.4k
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904
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tcl/tk dependency of biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
17.0 years ago grischa tödt ▴ 30
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1
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1.2k
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tcl/tk and biocLite
Genetics Cancer tkWidgets widgetTools marray Genetics Cancer tkWidgets widgetTools marray
updated 17.0 years ago by ★ 7.4k • written 17.0 years ago by ▴ 30
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6
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1.3k
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install Monograph problem
Cancer widgetTools Cancer widgetTools
17.0 years ago Seth Falcon ★ 7.4k
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1
reply
1.1k
views
paired design, LIMMA
cdf tkWidgets affy widgetTools limma affyio cdf tkWidgets affy widgetTools limma affyio
updated 17.0 years ago by ▴ 470 • written 17.0 years ago by 50k
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0
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1.1k
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marray and limma error with lmFit
Microarray Biobase DynDoc widgetTools limma arrayQuality marray convert Microarray DynDoc
17.0 years ago Paquet, Agnes ▴ 500
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0
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958
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Memory issues with limma and ImaGen file import
widgetTools limma widgetTools limma
17.3 years ago CV Markus ▴ 10
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10
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1.9k
views
Some Genefilter questions
Normalization Survival Cancer cdf genefilter geneplotter affy affydata widgetTools gcrma
updated 17.4 years ago by ▴ 460 • written 17.4 years ago by ▴ 70
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12
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1.9k
views
Some Genefilter questions
GO Survival cdf genefilter geneplotter tkWidgets affy affydata widgetTools gcrma affyPLM
updated 17.4 years ago by ★ 5.5k • written 17.4 years ago by ▴ 460
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0
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problems reading Illumina files using BeadExplorer
affy widgetTools limma marray convert affyio BeadExplorer affy widgetTools limma marray
17.5 years ago Vitalina Komashko ▴ 10
0
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1
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1.3k
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Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer tkWidgets widgetTools Cancer tkWidgets widgetTools
updated 17.6 years ago by ▴ 150 • written 17.7 years ago by ★ 2.9k
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views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
widgetTools widgetTools
17.7 years ago John E. Cornell, Ph.D. ▴ 150
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0
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813
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error running the example of the widget function in the widgetTools library
widgetTools widgetTools
18.0 years ago Hervé Pagès 16k
0
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1
reply
722
views
error running the example of the widget function in the widgetTools library
widgetTools widgetTools
updated 18.0 years ago by ★ 7.4k • written 18.0 years ago by ▴ 80
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3
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1.3k
views
widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 18.3 years ago by ★ 2.9k • written 18.3 years ago by ▴ 80
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1
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910
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 18.3 years ago by 65k • written 18.3 years ago by ▴ 890
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9
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1.9k
views
Getting LimmaGUI to run
tkWidgets widgetTools limmaGUI widgetInvoke tkWidgets widgetTools limmaGUI widgetInvoke
18.8 years ago chris umbricht ▴ 110
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2
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3.3k
views
Can't install tcl/tk on Mac OS 10.3.7
widgetTools widgetTools
updated 19.3 years ago by ▴ 430 • written 19.3 years ago by ▴ 10
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0
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1.0k
views
batch vs interactive behavior of reposTools()
Biobase DynDoc tkWidgets widgetTools Biobase DynDoc tkWidgets widgetTools
19.4 years ago Marion Hakanson ▴ 50
0
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0
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1.1k
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Tcl install
genefilter widgetTools genefilter widgetTools
19.5 years ago Matt McCall ▴ 50
0
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0
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1.1k
views
Re: Annotate clones Bioconductor beginner
Microarray Annotation GUI annotate widgetTools AnnBuilder Microarray Annotation GUI
20.4 years ago John Zhang ★ 2.9k
0
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3
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1.2k
views
Recent changes to Bioconductor packages
reposTools graph widgetTools limma reposTools graph widgetTools limma
20.6 years ago • updated 20.5 years ago madman@jimmy.harvard.edu ▴ 850
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0
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835
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update.packages
widgetTools widgetTools
20.8 years ago Justin Borevitz ▴ 90
0
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1
reply
866
views
ReadAffy error
widgetTools widgetTools
updated 20.9 years ago by ★ 2.3k • written 20.9 years ago by ★ 1.4k
0
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0
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697
views
Error in loading bioconductor packages in Rterm and ESS+XEmacs modes
GUI widgetTools GUI widgetTools
21.1 years ago Dr Mushtaq Ahmed ▴ 20
0
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2
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961
views
Problems Getting Started
cdf widgetTools cdf widgetTools
updated 21.1 years ago by ★ 1.1k • written 21.1 years ago by ▴ 340
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8
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2.1k
views
widgetTools
affy widgetTools affy widgetTools
updated 21.2 years ago by ▴ 40 • written 21.2 years ago by ▴ 90
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1
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848
views
Installation failed
reposTools widgetTools reposTools widgetTools
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 30
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4
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1.2k
views
Enabling the widget option
tkWidgets affy widgetTools tkWidgets affy widgetTools
21.3 years ago Tapan Mehta ▴ 270
30 results • Page 1 of 1
Recent ...
Replies
Answer: More regions in union when increasing DBA$config$mergeOverlap by Rory Stark ★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds) by Michael Love 41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds) by HAK • 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by ATpoint ★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM() by James W. MacDonald 65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Votes
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Awards • All
Scholar to Rory Stark ★ 5.2k
Popular Question to tangming2005 ▴ 190
Popular Question to Ian D. ▴ 70
Popular Question to junhui.li11 • 0
Scholar to James W. MacDonald 65k
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