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1
reply
2.3k
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Comment:
Comment: strange results from differential methylation analysis using limma
4 days ago
nabiyogesh
▴ 10
0
votes
0
replies
82
views
normalisation options in RnBeads
Epigenetics
RnBeads
R
Bioconducter
7 weeks ago
nabiyogesh
▴ 10
0
votes
0
replies
61
views
filtering options in RnBeads for array data
Epigenetics
RnBeads
MethylationArrayData
methylationArrayAnalysis
7 weeks ago
nabiyogesh
▴ 10
0
votes
0
replies
309
views
Comment:
Comment: error in RnBeads installation
8 weeks ago
nabiyogesh
▴ 10
1
vote
0
replies
378
views
Comment:
Comment: R package installation error
8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
378
views
Comment:
Comment: R package installation error
8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
378
views
Comment:
Comment: R package installation error
8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
378
views
Comment:
Comment: R package installation error
8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
378
views
Comment:
Comment: R package installation error
8 weeks ago
nabiyogesh
▴ 10
4
votes
8
replies
378
views
R package installation error
HPC
R
Bioconducter
8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
309
views
Comment:
Comment: error in RnBeads installation
9 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
309
views
Comment:
Comment: error in RnBeads installation
9 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
309
views
Comment:
Comment: error in RnBeads installation
9 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
309
views
Comment:
Comment: error in RnBeads installation
9 weeks ago
nabiyogesh
▴ 10
0
votes
8
replies
309
views
error in RnBeads installation
Epigenetics
RnBeads
R
10 weeks ago • updated 8 weeks ago
nabiyogesh
▴ 10
0
votes
1
reply
312
views
Comment:
Comment: Reading large file (15GB) in R
3 months ago
nabiyogesh
▴ 10
0
votes
3
replies
312
views
Reading large file (15GB) in R
R
Rstudio
Bioconducter
statistics
updated 12 weeks ago by
Sean Davis
21k • written 4 months ago by
nabiyogesh
▴ 10
0
votes
0
replies
1.7k
views
Comment:
C: How to add pseudocount to DESeq2 dds object
20 months ago
nabiyogesh
▴ 10
0
votes
2
replies
1.7k
views
Comment:
C: How to add pseudocount to DESeq2 dds object
20 months ago
nabiyogesh
▴ 10
3
votes
16
replies
1.7k
views
How to add pseudocount to DESeq2 dds object
deseq2
r
updated 6 months ago by
Stanley
▴ 10 • written 20 months ago by
nabiyogesh
▴ 10
0
votes
1
reply
203
views
Comment:
C: How to mention control by using contrast command in DESeq2
20 months ago
nabiyogesh
▴ 10
0
votes
0
replies
203
views
Comment:
C: How to mention control by using contrast command in DESeq2
20 months ago
nabiyogesh
▴ 10
0
votes
4
replies
203
views
How to mention control by using contrast command in DESeq2
DESeq2
20 months ago
nabiyogesh
▴ 10
0
votes
0
replies
328
views
Comment:
C: GOSeq analysis in rice
21 months ago
nabiyogesh
▴ 10
1
vote
2
replies
328
views
GOSeq analysis in rice
goseq
23 months ago • updated 21 months ago
nabiyogesh
▴ 10
0
votes
1
reply
2.3k
views
How to make PCA plot using DESeq2 for a group design
deseq2
updated 2.0 years ago by
Kevin Blighe
3.5k • written 2.0 years ago by
nabiyogesh
▴ 10
0
votes
1
reply
186
views
LFC shrinkage Normal_vs_apeglm
deseq2
updated 2.3 years ago by
Michael Love
36k • written 2.3 years ago by
nabiyogesh
▴ 10
0
votes
0
replies
363
views
Comment:
C: deseq2 differential gene expression and fold change
2.4 years ago
nabiyogesh
▴ 10
0
votes
1
reply
363
views
Comment:
C: deseq2 differential gene expression and fold change
2.4 years ago
nabiyogesh
▴ 10
0
votes
2
replies
363
views
Comment:
C: deseq2 differential gene expression and fold change
2.4 years ago
nabiyogesh
▴ 10
0
votes
5
replies
363
views
deseq2 differential gene expression and fold change
deseq2
2.4 years ago
nabiyogesh
▴ 10
1
vote
3
replies
370
views
deseq2 formula design
deseq2
updated 2.8 years ago by
swbarnes2
★ 1.0k • written 2.8 years ago by
nabiyogesh
▴ 10
0
votes
0
replies
370
views
Comment:
C: deseq2 formula design
2.8 years ago
nabiyogesh
▴ 10
0
votes
0
replies
291
views
taxonomy download from NCBI based on geneID
biomartr
Bioconducter
2.8 years ago
nabiyogesh
▴ 10
0
votes
0
replies
298
views
Comment:
C: vegdist for beta diversity
2.8 years ago
nabiyogesh
▴ 10
0
votes
1
reply
298
views
vegdist for beta diversity
vegan
2.8 years ago
nabiyogesh
▴ 10
0
votes
1
reply
886
views
Comment:
C: Phyloseq to metagenomeSeq
2.9 years ago
nabiyogesh
▴ 10
0
votes
1
reply
886
views
Comment:
C: Phyloseq to metagenomeSeq
2.9 years ago
nabiyogesh
▴ 10
0
votes
1
reply
574
views
Comment:
C: phyloseq to edgeR
2.9 years ago
nabiyogesh
▴ 10
0
votes
3
replies
574
views
phyloseq to edgeR
edger
updated 3.0 years ago by
Gordon Smyth
45k • written 3.0 years ago by
nabiyogesh
▴ 10
0
votes
1
reply
886
views
Comment:
C: Phyloseq to metagenomeSeq
3.0 years ago
nabiyogesh
▴ 10
0
votes
2
replies
886
views
Comment:
C: Phyloseq to metagenomeSeq
3.0 years ago
nabiyogesh
▴ 10
0
votes
10
replies
886
views
Phyloseq to metagenomeSeq
limma
metagenomeSeq
3.0 years ago
nabiyogesh
▴ 10
0
votes
1
reply
277
views
Phylpseq to deseq2
deseq2
updated 3.0 years ago by
Michael Love
36k • written 3.0 years ago by
nabiyogesh
▴ 10
0
votes
1
reply
485
views
Comment:
C: DESeq not showing all coefficient
3.0 years ago
nabiyogesh
▴ 10
0
votes
1
reply
485
views
Comment:
C: DESeq not showing all coefficient
3.0 years ago
nabiyogesh
▴ 10
0
votes
5
replies
485
views
DESeq not showing all coefficient
deseq2
updated 3.0 years ago by
Michael Love
36k • written 3.0 years ago by
nabiyogesh
▴ 10
0
votes
0
replies
590
views
Comment:
C: no gene names in deseq2 result file
3.0 years ago
nabiyogesh
▴ 10
0
votes
2
replies
590
views
no gene names in deseq2 result file
deseq2
updated 3.0 years ago by
Michael Love
36k • written 3.0 years ago by
nabiyogesh
▴ 10
0
votes
1
reply
1.3k
views
Comment:
C: Phyloseq to deseq2
3.2 years ago
nabiyogesh
▴ 10
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