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Showing :
epigenetics
•
reset
0
votes
0
replies
102
views
combat for batch effect correction in EPIC array data
Epigenetics
combat
EPIC
10 weeks ago
Jitendra
▴ 10
0
votes
0
replies
133
views
How to find regulatory region position and associated genes for CpG sites
Epigenetics
R
Bioconducter
3 months ago
Jitendra
▴ 10
0
votes
3
replies
248
views
batch effect in EPIC array data
statistics
Epigenetics
R
updated 3 months ago by
Lluís Revilla Sancho
▴ 710 • written 3 months ago by
Jitendra
▴ 10
0
votes
0
replies
118
views
rnbeads inference
epigenetics
RnBeads
4 months ago
Jitendra
▴ 10
0
votes
0
replies
220
views
Job:
EPA Postdoctoral Fellowship in Bioinformatics and Computational Toxicology
MethylSeq
Transcriptomics
Pathways
Epigenetics
RNASeq
6 months ago
whduke
• 0
0
votes
0
replies
354
views
Job:
Postdoctoral Fellow in Epigenomcis/Neurobiology (MGH/Harvard Medical School, Boston)
GenomicVariation
SingleCell
Autism
Neurogenesis
Epigenetics
7 months ago
sudhir.thakurela
• 0
0
votes
0
replies
367
views
Job:
Bioinformatics Research Scientist- Epigenetics Group
HiC
Epigenetics
HiCHIP
ChIPSeq
11 months ago
xubeisi
• 0
0
votes
6
replies
662
views
regression analysis for epic array methylation data using limma
limma
Epigenetics
STATISTICS
R
12 months ago
Jitendra
▴ 10
0
votes
0
replies
310
views
normalisation options in RnBeads
Epigenetics
RnBeads
R
Bioconducter
14 months ago
Jitendra
▴ 10
0
votes
0
replies
373
views
filtering options in RnBeads for array data
Epigenetics
RnBeads
MethylationArrayData
methylationArrayAnalysis
14 months ago
Jitendra
▴ 10
0
votes
8
replies
1.1k
views
error in RnBeads installation
Epigenetics
RnBeads
R
15 months ago • updated 14 months ago
Jitendra
▴ 10
0
votes
2
replies
1.1k
views
Beyond dmpFinder for methylation analysis, using limma for covariates
minfiDataEPIC
arrays
limma
minfi
Epigenetics
updated 2.5 years ago by
Gordon Smyth
47k • written 2.5 years ago by
Jeff
▴ 20
0
votes
0
replies
665
views
Job:
Computational Biology & Bioinformatics Postdoctoral Research Associate / Research Assistant (Fixed Term) in (Epi)Genomic Regulation of Cancer @ Unive…
cancer
computational biology
bioinformatics
epigenetics
Job
3.3 years ago
Shamith.Samarajiwa
▴ 180
0
votes
0
replies
720
views
Beta values and M values cluster differently
methylationEPIC
minfi
microarray
epigenetics
EPIC
4.2 years ago
rmf
▴ 20
0
votes
0
replies
592
views
Best normalisation method
microarray
methylationEPIC
epigenetics
minfi
EPIC
4.2 years ago
rmf
▴ 20
0
votes
0
replies
869
views
Job:
PhD computational position - Milan
epigenetics
transcription
computational biology
Job
5.9 years ago
mattia pelizzola
▴ 200
0
votes
1
reply
1.4k
views
Epigenetic clock (Horvath): package?
methylation
illimina 450k methylation
epigenetics
minfi
updated 6.2 years ago by
Wade Davis
▴ 60 • written 6.3 years ago by
Brian Smith
▴ 120
0
votes
1
reply
1.2k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
6.6 years ago • updated 6.4 years ago
Yuan Tian
▴ 90
0
votes
0
replies
1.0k
views
News:
ChAMP2 is online
epigenetics
EPIC
450K
ChAMP
News
6.7 years ago
Yuan Tian
▴ 90
0
votes
0
replies
2.4k
views
Job:
Bioinformatics Scientist position at Johns Hopkins
R
USA
Hopkins
GI Cancer
Epigenetics
Job
7.2 years ago
asharm37
• 0
1
vote
0
replies
1.5k
views
Job:
Post-doc Position in Epigenetic Bioinformatics
cancer
sequencing
epigenetics
computational biology
bioinformatics
Job
7.5 years ago
Yassen Assenov
▴ 10
0
votes
0
replies
1.3k
views
ChAMP: Error using champ.norm() function
ChAMP
methylation
epigenetics
7.6 years ago
jdangelo
• 0
0
votes
0
replies
1.3k
views
Job: Bioinformatics Analyst at Johns Hopkins Medical School (Masters or Ph.D.)
Sequencing
Epigenetics
PROcess
Sequencing
Epigenetics
PROcess
9.1 years ago
Brian Herb
▴ 80
0
votes
0
replies
1.6k
views
job: head of core facility bioinformatics (Mainz/Germany)
Epigenetics
Infrastructure
Epigenetics
Infrastructure
9.4 years ago
Holger Klein
▴ 20
0
votes
0
replies
1.2k
views
[Course] CSAMA 2013: Computational Statistics for Genome Biology (11th edition) Brixen, Italy, June 24-28th 2013
Sequencing
Epigenetics
Cancer
Sequencing
Epigenetics
Cancer
10.3 years ago
stefano iacus
▴ 430
0
votes
0
replies
1.2k
views
IS PROGRAMMER/ANALYST I / 40 HOUR / DAY / BWH - CHANNING LABORATORY
Epigenetics
Annotation
Network
Epigenetics
Annotation
Network
11.3 years ago
Guest User
★ 12k
0
votes
3
replies
1.1k
views
how to install gnGNF1a cdf and probe files to a recent version of R (2.13.1)?
Epigenetics
cdf
Epigenetics
cdf
updated 11.5 years ago by
James W. MacDonald
63k • written 11.5 years ago by
Nicholas Wong
▴ 30
0
votes
0
replies
1.1k
views
Position Assistant Professor Bioinformatics
Epigenetics
Epigenetics
11.7 years ago
Martin Zenke
▴ 10
0
votes
0
replies
1.6k
views
4 PhD positions in cancer computational biology
Sequencing
Epigenetics
Cancer
Sequencing
Epigenetics
Cancer
11.8 years ago
mattia pelizzola
▴ 200
0
votes
0
replies
1.2k
views
[job] Postdoc position on the bioinfomatics of epigenetic circuits in genome programming and reprogramming at the European Institute of Oncology in M…
RNASeq
ChIPSeq
Epigenetics
Cancer
chipseq
SANTA
RNASeq
ChIPSeq
Epigenetics
Cancer
SANTA
11.8 years ago
stefano iacus
▴ 430
0
votes
0
replies
1.1k
views
Head of Junior Research Group - Bioinformatics
Epigenetics
Epigenetics
11.8 years ago
Qiong Lin
▴ 10
0
votes
3
replies
2.0k
views
edgeR - multiple comparisions
Epigenetics
GO
edgeR
Epigenetics
GO
edgeR
updated 12.0 years ago by
Sridhara Gupta Kunjeti
▴ 320 • written 12.0 years ago by
Davis McCarthy
▴ 260
0
votes
0
replies
1.5k
views
qPCR Events and 30% Discount on qPCR workshops
miRNA
qPCR
Epigenetics
GO
Visualization
Network
probe
microRNA
miRNA
qPCR
Epigenetics
13.6 years ago
qPCR Platform - the reference in real-t…
▴ 170
0
votes
2
replies
2.0k
views
pd.hugene.1.0.st.v1
Epigenetics
Annotation
oligo
Epigenetics
Annotation
oligo
updated 13.8 years ago by
Benilton Carvalho
★ 4.3k • written 13.8 years ago by
Mark Robinson
★ 1.1k
0
votes
0
replies
1.4k
views
Post-doc position in Paris
Sequencing
Epigenetics
Cancer
Breast
DECIPHER
Sequencing
Epigenetics
Cancer
Breast
13.9 years ago
Joern Toedling
▴ 450
0
votes
0
replies
964
views
Bioinformatics postdoc in Brussels
Sequencing
Epigenetics
Cancer
Breast
Sequencing
Epigenetics
Cancer
Breast
14.2 years ago
Vincent Detours
▴ 80
0
votes
0
replies
857
views
browseGenome width question (rtracklayer)
Epigenetics
GO
hgu95av2
GLAD
rtracklayer
Epigenetics
GO
hgu95av2
GLAD
rtracklayer
14.3 years ago
Michael Lawrence
▴ 620
0
votes
0
replies
971
views
sd==0 for some probesets when using gcrma
Microarray
Proteomics
Epigenetics
Normalization
GO
Cancer
hgu95av2
affy
graph
gcrma
GO
14.5 years ago
Dick Beyer
★ 1.4k
0
votes
1
reply
1.0k
views
Prokaryotic_Rhodobacter capsulatus GEP
Epigenetics
cdf
affy
makecdfenv
plier
affxparser
preprocessCore
Epigenetics
cdf
affy
updated 14.5 years ago by
dorothyc
▴ 140 • written 14.5 years ago by
James W. MacDonald
63k
0
votes
0
replies
1.1k
views
Create affyBatch from mouse exon array data using ReadAffy or extractAffyBatch() from aroma.affymetrix
Epigenetics
Cancer
probe
affy
xps
Epigenetics
Cancer
probe
affy
xps
14.9 years ago
Martin Morgan
25k
0
votes
1
reply
894
views
Fwd: biomaRt column order
Epigenetics
biomaRt
Epigenetics
biomaRt
14.9 years ago
steffen@stat.Berkeley.EDU
▴ 600
0
votes
0
replies
694
views
[ Re: Fwd: biomaRt column order]
Epigenetics
biomaRt
Epigenetics
biomaRt
14.9 years ago
steffen@stat.Berkeley.EDU
▴ 600
0
votes
0
replies
1.5k
views
Bioinformatics Positions, National Cancer Centre Singapore
Microarray
Epigenetics
Cancer
Microarray
Epigenetics
Cancer
15.1 years ago
Julian Lee
▴ 140
0
votes
0
replies
1.3k
views
Senior Bioinformatics Research Scientist Position at Garvan Institute, Australia
Epigenetics
Bayesian
Cancer
Breast
Epigenetics
Bayesian
Cancer
Breast
15.4 years ago
Jean Yee Hwa Yang
▴ 130
0
votes
0
replies
1.1k
views
Bioinformatics positions
Microarray
Genetics
Proteomics
Epigenetics
Microarray
Genetics
Proteomics
Epigenetics
15.5 years ago
French, Jef NIH/NIEHS
▴ 30
45 results • Page
1 of 1
Recent ...
Replies
Answer: Can VST-transformed community composition data be expressed as relative abundanc
by
Michael Love
40k
The point of the VST is to make the data systematically homoskedastic (that is, not systematic trend of variance over mean, but not e.g. fo…
Comment: How to update a package at Bioconductor
by
ma79
• 0
thanks, just informed the original maintainer to send an email.
Comment: Error: biomaRt has encountered an unexpected server error.
by
Mike Smith
★ 6.0k
Unfortunately, the BioMart LDS functionality have been flaky for a while now e.g. https://support.bioconductor.org/p/9143401/ , https:/…
Comment: Use with_go along with other filters in getBM function
by
Mike Smith
★ 6.0k
Hi @rubbit0, I'm not sure I understand what you're trying to do. Do you have a long list of Ensembl Gene IDs and you're trying to select …
Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat
by
Anna
▴ 20
Dear Gordon, these are my metadata. As you see some subject are missing for timepoint 1 Subject Timepoint 1 ID1 Baselin…
Votes
Dispersion plot -Interpretation -DESeq2
Answer: Dispersion Estimates and MA plots
DESeq2: When to split multiple group samples for 'more' accurate sizefactors, dispersions etc.
WGCNA coupled with differential expression analysis: question about baseline module detection
WGCNA with paired samples
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