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Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
2.5 years ago Marcelo Laia ▴ 450
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457
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Use limma to a non-genomic data
non-genomic quantitative limma
3.0 years ago Marcelo Laia ▴ 450
3
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3
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769
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AnnotationForge run by three days and do not end
annotation AnnotationForge
4.0 years ago Marcelo Laia ▴ 450
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1
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1.2k
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limma technical replicates and biological replicates in the same design
limma SANTA limma SANTA
updated 4.9 years ago by 50k • written 14.6 years ago by ▴ 450
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1
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822
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Is possible to use NOISeq with counts from RSubread?
noiseq rsubread tophat bowtie bowtie2
4.9 years ago Marcelo Laia ▴ 450
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1.3k
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Clustering large dataset
HeatMap Cairo Graphics Device Failed to create Cairo backend seqplots
updated 5.2 years ago by 3.9k • written 5.2 years ago by ▴ 450
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1.6k
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qRT-PCR Sample Maximization software analysis and proper experimental design advice
qPCR Sample Maximization Analysis Experimental Design qRT-PCR
updated 9.0 years ago by 50k • written 9.0 years ago by ▴ 450
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1.1k
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timecourse package - Missing data
TimeCourse timecourse TimeCourse timecourse
updated 14.2 years ago by ▴ 440 • written 14.2 years ago by ▴ 450
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810
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OFF TOPIC high-density SSU rRNA microarray
Microarray SANTA Microarray SANTA
14.6 years ago Marcelo Laia ▴ 450
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929
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[limma] Possible bug on read.maimages function ?
Annotation limma SANTA Annotation limma SANTA
14.6 years ago Marcelo Laia ▴ 450
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1.4k
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limma Time Course Experiments question
graph limma SANTA graph limma SANTA
15.1 years ago Marcelo Laia ▴ 450
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1
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1.1k
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No degree of freedom in maanova
maanova maanova
15.2 years ago • updated 15.1 years ago Marcelo Laia ▴ 450
0
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0
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752
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OFF TOPIC How did we control for or remove background hybridization to the vector backbone ?
Normalization limma Normalization limma
15.5 years ago Marcelo Laia ▴ 450
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0
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579
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Categories microarray data in functional profiles
Microarray Annotation GO Category Microarray Annotation GO Category
15.8 years ago Marcelo Laia ▴ 450
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663
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Question about Error in next.fix:(next.fix + ncols - 1) : NA/NaN argument
Genetics Genetics
16.0 years ago Marcelo Laia ▴ 450
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0
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1.0k
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limma Factorial 2x2x2x4 : Did I a correct parametrization ?
limma limma
16.2 years ago Marcelo Laia ▴ 450
0
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1
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1.4k
views
maSigPro Problems in see.genes
updated 16.2 years ago by ▴ 340 • written 16.2 years ago by ▴ 450
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0
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900
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[SOLVED] Factorial experiment: No degree of freedom in maanova
maanova maanova
16.2 years ago Marcelo Laia ▴ 450
0
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0
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777
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Factorial experiment: No degree of freedom in maanova
maanova maanova
16.2 years ago Marcelo Laia ▴ 450
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0
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587
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Help on basic skills on R and maanova
16.8 years ago Marcelo Laia ▴ 450
0
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1
reply
937
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Needed help on maanova fitmaanova function
affy vsn limma maanova affyio affy vsn limma maanova affyio
16.8 years ago Marcelo Laia ▴ 450
0
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7
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1.2k
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Extract M values from probes set to cluster
updated 17.2 years ago by 21k • written 17.2 years ago by ▴ 450
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4
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1.4k
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cluster a set of genes based on another set of genes
Organism limma Organism limma
updated 17.2 years ago by ▴ 280 • written 17.2 years ago by ▴ 450
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2
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1.1k
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Time course cDNA two color array analysis
TimeCourse limma timecourse maSigPro TimeCourse limma timecourse maSigPro
17.3 years ago Marcelo Laia ▴ 450
0
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1
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768
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Spot duplicate in timecourse package and "missing" values
TimeCourse limma timecourse TimeCourse limma timecourse
updated 17.3 years ago by ▴ 440 • written 17.3 years ago by ▴ 450
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2
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620
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help in normalization cDNA arrays
updated 17.3 years ago by ★ 1.9k • written 17.3 years ago by ▴ 450
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0
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645
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[limma] Error: nestedF method can't handle NA p-values
17.3 years ago Marcelo Laia ▴ 450
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0
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823
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Advice on how to compare two different sources on cDNA
limma weaver limma weaver
17.3 years ago Marcelo Laia ▴ 450
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5
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1.7k
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Rgraphviz problem
annotate graph Rgraphviz annotate graph Rgraphviz
updated 17.3 years ago by ★ 7.4k • written 17.3 years ago by ▴ 450
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