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1.6k
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Comment: C: problem recasting InteractionSet into a DGEList
3.6 years ago liz.ingsimmons ▴ 140
0
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0
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1.0k
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Comment: C: GenomicInteractions duplicate annotations
3.9 years ago liz.ingsimmons ▴ 140
0
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1
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1.0k
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Comment: C: GenomicInteractions duplicate annotations
3.9 years ago liz.ingsimmons ▴ 140
0
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1
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1.0k
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Comment: C: GenomicInteractions duplicate annotations
3.9 years ago liz.ingsimmons ▴ 140
0
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1
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1.0k
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Answer: A: GenomicInteractions duplicate annotations
3.9 years ago liz.ingsimmons ▴ 140
0
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1
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788
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Comment: C: duplicated interactions using package GenomicInteractions
4.0 years ago liz.ingsimmons ▴ 140
0
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1
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788
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Comment: C: duplicated interactions using package GenomicInteractions
4.1 years ago liz.ingsimmons ▴ 140
0
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0
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1.1k
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Comment: C: col.interactions.types for gviz InteractionTrack from the GenomicInteractions
4.2 years ago liz.ingsimmons ▴ 140
0
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1
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1.1k
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Answer: A: col.interactions.types for gviz InteractionTrack from the GenomicInteractions
4.2 years ago liz.ingsimmons ▴ 140
0
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0
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1.1k
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Answer: C: col.interactions.types for gviz InteractionTrack from the GenomicInteractions
4.2 years ago liz.ingsimmons ▴ 140
2
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2
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763
views
Answer: A: Export annotation from GenomicInteractions package
4.9 years ago liz.ingsimmons ▴ 140
1
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1
reply
994
views
Excluding reads with a certain tag using tagFilter from Rsamtools
rsamtools
updated 4.9 years ago by 25k • written 4.9 years ago by ▴ 140
0
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1
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1.4k
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Answer: A: Gviz (GenomicInteractions) arc height and boundaries
4.9 years ago liz.ingsimmons ▴ 140
0
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0
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1.7k
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Comment: C: Unexpected behaviour of set operations on GRanges objects when dplyr is loaded
5.3 years ago liz.ingsimmons ▴ 140
0
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0
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1.7k
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Comment: C: Unexpected behaviour of set operations on GRanges objects when dplyr is loaded
5.3 years ago liz.ingsimmons ▴ 140
0
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4
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1.7k
views
Unexpected behaviour of set operations on GRanges objects when dplyr is loaded
GenomicRanges S4Vectors dplyr
updated 5.3 years ago by 65k • written 5.3 years ago by ▴ 140
0
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1
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1.2k
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Answer: A: Visualizing 4c-seq as arc
5.4 years ago liz.ingsimmons ▴ 140
0
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2
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1.2k
views
seqlevelsStyle for chrY in Drosophila?
genomeinfodb dmel seqlevelsstyle
updated 6.9 years ago by ▴ 50 • written 6.9 years ago by ▴ 140
0
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1
reply
2.0k
views
Error in ChIPQC: "Error in if (res >= minval) { : missing value where TRUE/FALSE needed"
chipqc
updated 7.9 years ago by ★ 5.1k • written 8.1 years ago by ▴ 140
3
votes
1
reply
1.1k
views
shiftApply verbosity (in ChIPQC)
ChIPQC s4vectors
updated 7.9 years ago by ▴ 420 • written 8.1 years ago by ▴ 140
2
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0
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2.5k
views
Comment: C: Plotting genomic interactions in Gviz
8.0 years ago liz.ingsimmons ▴ 140
2
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1
reply
2.5k
views
Answer: A: Plotting genomic interactions in Gviz
8.0 years ago liz.ingsimmons ▴ 140
0
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1
reply
6.7k
views
Comment: C: manipulate bedpe format files
8.1 years ago liz.ingsimmons ▴ 140
0
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1
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1.7k
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Comment: C: ENCODExplorer doesn't return results which are on the website
8.1 years ago liz.ingsimmons ▴ 140
1
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1
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1.7k
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Comment: C: ENCODExplorer doesn't return results which are on the website
8.1 years ago liz.ingsimmons ▴ 140
0
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2
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1.4k
views
ENCODExplorer update snapshot: 404 error
encodexplorer
8.1 years ago liz.ingsimmons ▴ 140
0
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0
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1.4k
views
Comment: C: ENCODExplorer update snapshot: 404 error
8.1 years ago liz.ingsimmons ▴ 140
0
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0
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1.7k
views
Comment: C: ENCODExplorer doesn't return results which are on the website
8.1 years ago liz.ingsimmons ▴ 140
6
votes
7
replies
1.7k
views
ENCODExplorer doesn't return results which are on the website
encodexplorer
updated 8.1 years ago by ★ 6.5k • written 8.1 years ago by ▴ 140
0
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1
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1.8k
views
Comment: C: Man pages with runnable examples calculation
8.1 years ago liz.ingsimmons ▴ 140
1
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3
replies
1.8k
views
Man pages with runnable examples calculation
BiocCheck
updated 8.1 years ago by ★ 8.2k • written 8.1 years ago by ▴ 140
0
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1
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1.1k
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Answer: A: GenomicInteractions read in bedpe error
8.2 years ago liz.ingsimmons ▴ 140
2
votes
3
replies
1.5k
views
Is there an easy way to extend coverage to seqlengths and fill with zeroes?
coverage s4vectors seqlengths
8.2 years ago liz.ingsimmons ▴ 140
0
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1
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1.5k
views
Comment: C: Is there an easy way to extend coverage to seqlengths and fill with zeroes?
8.2 years ago liz.ingsimmons ▴ 140
6
votes
7
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2.9k
views
Error: Failed to set session genome to...
gviz rtracklayer
updated 8.6 years ago by ★ 1.6k • written 8.9 years ago by ▴ 140
0
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0
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1.4k
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Comment: C: importing bigwig file: "sequence names not known"
8.7 years ago liz.ingsimmons ▴ 140
1
vote
2
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1.4k
views
importing bigwig file: "sequence names not known"
rtracklayer
updated 8.7 years ago by ★ 11k • written 8.7 years ago by ▴ 140
4
votes
8
replies
2.3k
views
ChIPQC v1.4 fails uninformatively where version 1.2 works fine
chipqc
updated 8.8 years ago by ★ 5.1k • written 9.0 years ago by ▴ 140
0
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0
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2.9k
views
Comment: C: Error: Failed to set session genome to...
8.9 years ago liz.ingsimmons ▴ 140
8
votes
5
replies
2.6k
views
import wig to coverage
rtracklayer granges import.wig
updated 9.2 years ago by 16k • written 9.2 years ago by ▴ 140
0
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0
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2.6k
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Comment: C: import wig to coverage
9.2 years ago liz.ingsimmons ▴ 140
0
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1
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2.6k
views
Comment: C: import wig to coverage
9.2 years ago liz.ingsimmons ▴ 140
0
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0
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3.2k
views
Comment: C: extracting distance from Hits object
9.2 years ago liz.ingsimmons ▴ 140
4
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2
replies
3.2k
views
extracting distance from Hits object
genomicranges iranges
updated 9.2 years ago by 16k • written 9.2 years ago by ▴ 140
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