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dplyr
•
reset
8
votes
20
replies
10k
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ah <- AnnotationHub() Error in UseMethod("filter_"): no applicable method for 'filter_' applied to an object of class "c('tbl_SQLiteConnection', 'tb…
AnnotationHub
dplyr
18 months ago • updated 9 months ago
georgia.katsoula
▴ 40
8
votes
4
replies
434
views
Tidyverse can be a bit tidiest to work with....
dplyr
tidyr
updated 21 months ago by
Martin Morgan
25k • written 21 months ago by
Marco Blanchette
▴ 30
0
votes
4
replies
920
views
Unexpected behaviour of set operations on GRanges objects when dplyr is loaded
GenomicRanges
S4Vectors
dplyr
updated 3.3 years ago by
James W. MacDonald
59k • written 3.3 years ago by
liz.ingsimmons
▴ 140
0
votes
2
replies
1.2k
views
Error in print.header("GDCquery: Searching in GDC database", "section") :could not find function "print.header",
tcgabiolinks
dplyr
DT
3.7 years ago
Mithil Gaikwad
• 0
8
votes
2
replies
1.7k
views
exprs function - clash with dplyr
exprs
dplyr
Biobase
4.0 years ago
Wolfgang Huber
13k
8
votes
4
replies
4.1k
views
Error UseMethod ("select_"): from bioconductor dplyr select package
bioconductor
dplyr
select
updated 4.6 years ago by
Martin Morgan
25k • written 4.6 years ago by
abedini.jaleh
▴ 10
3
votes
1
reply
771
views
Parallel Join Excessively Slow
biocparallel
curatedmetagenomicdata
parallel
dplyr
updated 5.4 years ago by
Martin Morgan
25k • written 5.4 years ago by
Lucas Schiffer
▴ 240
3
votes
5
replies
16k
views
Any quick solution for fixing error : "$ operator is invalid for atomic vectors" ?
r
granges
dplyr
error handling
updated 5.6 years ago by
Mike Smith
★ 5.5k • written 5.6 years ago by
Jurat Shahidin
▴ 70
3
votes
0
replies
2.9k
views
Tutorial:
dplyr and the GEOmetadb package for mining NCBI GEO metadata
geometadb
dplyr
Tutorial
7.0 years ago
Sean Davis
21k
9 results • Page
1 of 1
Recent ...
Replies
Comment: Methods for removing unexpressed probes of Human Transcriptome Array HTA 2.0
by
Yang Shi
• 0
Perfect answer! This questions troubled me for a long time. Thanks again and for your quick and detailed reply.
Comment: HTSeq Counts no longer available
by
swbarnes2
★ 1.0k
STAR's output was intended to mimic HTseq-counts.
Answer: Methods for removing unexpressed probes of Human Transcriptome Array HTA 2.0
by
James W. MacDonald
59k
In the previous post I noted that `paCalls` doesn't exist for this array, and that is still true today. And there are no methods similar to…
Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
by
Rory Stark
★ 4.4k
Could you let me know the versions? Output of `sessionInfo()`.
Comment: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o
by
Yang Shi
• 0
okay sir, the new post is here (https://support.bioconductor.org/p/9144266/). Looking forward to your reply.
Votes
Answer: Use MulticoreParam under BatchtoolsParam
Answer: Variance explained (coefficient of determination) in edgeR
HTSeq Counts no longer available
Comment: Problem converting transcript to genomic coordinates with Annotation Hub
Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU
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