Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
1.5k
views
Comment: Comment: select with org.Mm.eg.db does not give ENSEMBL ids
3.0 years ago raf4 ▴ 30
1
vote
2
replies
1.5k
views
select with org.Mm.eg.db does not give ENSEMBL ids
org.Mm.eg.db
3.0 years ago raf4 ▴ 30
0
votes
0
replies
1.2k
views
Comment: Comment: should smooth quantile normalization be used with limma-voom?
3.5 years ago raf4 ▴ 30
2
votes
2
replies
1.2k
views
should smooth quantile normalization be used with limma-voom?
limma-voom smooth-quantile-normalization quantro
3.5 years ago raf4 ▴ 30
0
votes
1
reply
3.1k
views
How to remove duplicate files per case in TCGAbiolonks
TCGAbiolinks
4.2 years ago raf4 ▴ 30
0
votes
0
replies
3.1k
views
Answer: Answer: How to remove duplicate files per case in TCGAbiolonks
4.2 years ago raf4 ▴ 30
0
votes
0
replies
2.1k
views
Comment: Comment: Difficulty dowloading hg38 cnv data in tcgabiolinks
4.2 years ago raf4 ▴ 30
1
vote
2
replies
2.1k
views
Difficulty dowloading hg38 cnv data in tcgabiolinks
TCGAbiolinks cnv
4.3 years ago • updated 4.2 years ago raf4 ▴ 30
4
votes
14
replies
2.4k
views
Application of quantro to RNASeq: I do not get the same results as are in the quantro paper supplement
quantro RNASeq
updated 5.7 years ago by ▴ 80 • written 5.7 years ago by ▴ 30
0
votes
1
reply
2.4k
views
Application of RUV to a small Nanostring dataset
RUV Nanostring RUV-III
updated 5.8 years ago by ▴ 20 • written 6.5 years ago by ▴ 30
0
votes
0
replies
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
6.6 years ago raf4 ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
13
replies
4.0k
views
error message with BiocManager::install on Mac console that's not on mac command line
BiocManager Mac
updated 6.6 years ago by 25k • written 6.6 years ago by ▴ 30
0
votes
0
replies
4.0k
views
Comment: C: error message with BiocManager::install on Mac console that's not on mac command
6.6 years ago raf4 ▴ 30
0
votes
0
replies
4.0k
views
Comment: C: Use of pseudoalignment estimated counts as input to edgeR and Limma-Voom
7.0 years ago raf4 ▴ 30
0
votes
1
reply
4.0k
views
Comment: C: Use of pseudoalignment estimated counts as input to edgeR and Limma-Voom
7.0 years ago raf4 ▴ 30
6
votes
8
replies
4.0k
views
Use of pseudoalignment estimated counts as input to edgeR and Limma-Voom
RNASeq-quantification edgeR TPM
updated 7.0 years ago by 53k • written 7.0 years ago by ▴ 30
0
votes
2
replies
4.0k
views
Comment: C: Use of pseudoalignment estimated counmts as input to edgeR and Limma-Voom
7.0 years ago raf4 ▴ 30
0
votes
0
replies
49k
views
Comment: C: Differential expression analysis starting from TPM data
7.0 years ago raf4 ▴ 30
0
votes
0
replies
49k
views
Comment: C: Differential expression analysis starting from TPM data
7.0 years ago raf4 ▴ 30
0
votes
0
replies
49k
views
Comment: C: Differential expression analysis starting from TPM data
7.0 years ago raf4 ▴ 30
0
votes
1
reply
49k
views
Comment: C: Differential expression analysis starting from TPM data
7.0 years ago raf4 ▴ 30
1
vote
5
replies
1.7k
views
Error message with Voom with blocked design matrix
voom blocked design limma
updated 7.7 years ago by 53k • written 7.7 years ago by ▴ 30
0
votes
1
reply
1.7k
views
Comment: A: Error message with Voom with blocked design matrix
updated 7.7 years ago by 53k • written 7.7 years ago by ▴ 30
0
votes
0
replies
1.7k
views
Comment: C: Error message with Voom with blocked design matrix
updated 7.7 years ago by 53k • written 7.7 years ago by ▴ 30
2
votes
1
reply
1.2k
views
Minimum in Voomplot
limma voom
updated 7.9 years ago by ★ 7.9k • written 7.9 years ago by ▴ 30
2
votes
2
replies
1.4k
views
should subgroups of comparisons be analyzed separately in Limma
limma design matrix
updated 8.2 years ago by ▴ 690 • written 8.2 years ago by ▴ 30
0
votes
4
replies
1.7k
views
discrepancy between genes corresponding to gene ontology terms in org.Mm.eg.db and in AMIGO
gene ontology
8.3 years ago raf4 ▴ 30
0
votes
0
replies
1.7k
views
Answer: A: discrepancy between genes corresponding to gene ontology terms in org.Mm.eg.db a
8.3 years ago raf4 ▴ 30
0
votes
1
reply
1.7k
views
Comment: C: discrepancy between genes corresponding to gene ontology terms in org.Mm.eg.db a
8.3 years ago raf4 ▴ 30
1
vote
1
reply
2.9k
views
Comment: C: Subject: Strange glitch in Voom curve resulting from batch effects
8.6 years ago raf4 ▴ 30
0
votes
0
replies
4.8k
views
Comment: C: Problem running featurecounts in Rsubread on GFF file
8.7 years ago raf4 ▴ 30
0
votes
1
reply
2.0k
views
Comment: C: problem running featurecounts using hg38 in-built annotation
8.7 years ago raf4 ▴ 30
0
votes
2
replies
2.0k
views
problem running featurecounts using hg38 in-built annotation
featurecounts hg38
8.7 years ago raf4 ▴ 30
0
votes
1
reply
4.8k
views
Comment: C: Problem running featurecounts in Rsubread on GFF file
8.7 years ago raf4 ▴ 30
0
votes
2
replies
4.8k
views
Problem running featurecounts in Rsubread on GFF file
rsubread featurecounts gff Grch38.p7 vs hg38
8.7 years ago raf4 ▴ 30
0
votes
1
reply
2.1k
views
Answer: A: Rsubread crash on Mac during alignment
8.7 years ago raf4 ▴ 30
0
votes
5
replies
2.1k
views
Rsubread crash on Mac during alignment
software error rsubread
9.0 years ago • updated 8.7 years ago raf4 ▴ 30
1
vote
1
reply
2.9k
views
Comment: C: Subject: Strange glitch in Voom curve resulting from batch effects
8.7 years ago raf4 ▴ 30
4
votes
10
replies
2.9k
views
Subject: Strange glitch in Voom curve resulting from batch effects
limma voom batcheffect covariate
updated 8.7 years ago by 53k • written 8.7 years ago by ▴ 30
0
votes
1
reply
2.9k
views
Comment: C: Subject: Strange glitch in Voom curve resulting from batch effects
updated 8.7 years ago by 53k • written 8.7 years ago by ▴ 30
0
votes
0
replies
2.9k
views
Comment: A: Subject: Strange glitch in Voom curve resulting from batch effects
updated 8.7 years ago by 53k • written 8.7 years ago by ▴ 30
0
votes
1
reply
2.9k
views
Comment: C: Subject: Strange glitch in Voom curve resulting from batch effects
8.7 years ago raf4 ▴ 30
0
votes
1
reply
1.5k
views
Normalization and batch effect adjustment of fluidgm pcr data to be analyzed with Limma
fluidigm normalization limma pcr
updated 9.0 years ago by 53k • written 9.0 years ago by ▴ 30
0
votes
0
replies
1.3k
views
Error message in Rsubread detectionCall command
Rsubread
9.9 years ago raf4 ▴ 30
49 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6