Bioconductor Forum

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topGO

4 hours ago adendekk • 0

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Biobase

8 hours ago NATASHA • 0

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DESeq2 DifferentialExpression

updated 18 hours ago by ATpoint ★ 4.1k • written 18 hours ago by sajadahmad41454 • 0

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200

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DESeq2 DifferentialExpression rnaseqGene DifferentialRegulation

updated 3 hours ago by swbarnes2 ★ 1.4k • written 2 days ago by sajadahmad41454 • 0

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282

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Proteomics limma

updated 13 hours ago by James W. MacDonald 65k • written 3 days ago by Abbey • 0

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265

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limma edgeR RNASeq

updated 20 hours ago by Gordon Smyth 50k • written 22 days ago by Shaimaa Gamal • 0

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478

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Bioconductor

updated 8 hours ago by NATASHA • 0 • written 3 months ago by DS ▴ 10

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SingleR

written 7 months ago by saeed.khalili • 0

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2.8k

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bootRanges nullranges

updated 13 hours ago by Michael Love 42k • written 15 months ago by Poonam • 0

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1.5k

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DESeq2 SpikeIn Normalization

updated 15 hours ago by maria.soler • 0 • written 15 months ago by kalavattam ▴ 10

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Comment: deseq2 results by swbarnes2 ★ 1.4k

Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …

Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>