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Once again a "Model matrix not full rank"
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51 minutes ago • updated 30 minutes ago arfranco ▴ 130
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NEED FOR NESSASORY HELP
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DESeq2 v1.35.0
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updated 5 hours ago by 41k • written 5 hours ago by • 0
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Although I successfully installed the package "simpleaffy'' , I cannot library it. Why?
simpleaffy
updated 4 hours ago by 65k • written 2.3 years ago by • 0
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DiffBind: no peaks in DBA object
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More regions in union when increasing DBA$config$mergeOverlap
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1 day ago • updated 6 hours ago Ian D. ▴ 70
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Job: Postdoctoral Position in Bioinformatics - Mainz, Germany
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Differences in differential analysis methods for RNA-Seq
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Get genomic coordinates of CpGs sites (chromosomes, genomic position)
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1 day ago • updated 20 hours ago Yveto • 0
15 results • Page 1 of 1
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Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k
In that case both time and treatment are identical things, so choose one and go with it.
Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130
numbers 1 to 3 represent observations and/or replicates Control is control. The three controls are shown as Control_1, control_2 and Contr…
Answer: Once again a "Model matrix not full rank" by James W. MacDonald 65k
The time and treatment are essentially the same thing, so you cannot have both in the model at the same time. Do the numbers 1:3 represent …
Answer: DESeq2 v1.35.0 by Michael Love 41k
That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k
Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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