3
votes
1
reply
1.5k
views
Limma without eBayes, is it indistunguishable from Ordinary Least Square?
Limma ebayes bayesian ls
updated 23 hours ago by 50k • written 5.6 years ago by ▴ 10
3
votes
5
replies
186
views
Help with running egsea()
EGSEA
2 days ago • updated 23 hours ago Chris • 0
3
votes
4
replies
321
views
Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it does not happen in Linux
GenomAutomorphism
updated 14 hours ago by ★ 6.5k • written 3 days ago by • 0
2
votes
4
replies
1.7k
views
EGSEA usage with microarray data (with vooma)?
EGSEA gene set testing vooma limma voom gsea
updated 4 hours ago by • 0 • written 7.3 years ago by ▴ 190
1
vote
5
replies
1.4k
views
Cannot connect to ExperimentHub server
ExperimentHub
updated 22 hours ago by • 0 • written 5 months ago by • 0
1
vote
6
replies
149
views
Extremely small p-values using Limma for proteomic data
Proteomics limma
updated 18 hours ago by ★ 3.3k • written 1 day ago by • 0
1
vote
3
replies
244
views
Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call when trying to subset pheatmap
DESeq2
updated 19 hours ago by ★ 4.1k • written 7 days ago by • 0
0
votes
0
replies
5
views
Multi-factorial, longitudinal disease progression analysis with unbalanced patient sampling - duplicateCorrelation or blocking?
rna-seq duplicateCorrelation limma voom
46 minutes ago Dylan.Sheerin • 0
0
votes
3
replies
178
views
More regions in union when increasing DBA$config$mergeOverlap
DiffBind
7 days ago • updated 17 hours ago Ian D. ▴ 70
0
votes
2
replies
64
views
deseq2 results
DESeq2 DifferentialExpression rnaseqGene DifferentialRegulation
updated 9 hours ago by ★ 1.3k • written 18 hours ago by • 0
0
votes
35
replies
2.6k
views
How to use bootRanges to bootstrap small RNA loci (nullranges package)
bootRanges nullranges
updated 8 hours ago by 42k • written 15 months ago by • 0
11 results • Page 1 of 1
Recent ...
Replies
Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results by swbarnes2 ★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Awards • All
Teacher to Michael Love 42k
Popular Question to Haibo Liu • 0
Popular Question to HS ▴ 10
Popular Question to DevelopingHippo • 0
Scholar to Robert Castelo ★ 3.3k
Locations • All
Australia, 4 minutes ago
South Korea, 21 minutes ago
India, 26 minutes ago
The city by the bay, 47 minutes ago
WEHI, Melbourne, Australia, 48 minutes ago
Traffic: 456 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6