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5
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1.7k
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compiler for R running bioconductor
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Arguments to getGEO?
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updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 750
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Affymetrix Yeast Tiling Arrays
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17.4 years ago Darlene Goldstein ▴ 230
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LIMMA moderated standard errors?
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17.4 years ago Paul Harrison ▴ 10
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8
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Fold change GEO data
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subsetting the genes for cluster
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updated 17.4 years ago by ▴ 910 • written 17.4 years ago by ▴ 340
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797
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about multi-platforms genechip
updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 50
1
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4
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4.4k
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Rgraphviz fontsize
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updated 17.4 years ago by 6.7k • written 17.4 years ago by ▴ 80
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848
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Data consisting of several groups, persons, and cells
17.4 years ago Seungwoo Hwang ▴ 80
0
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0
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796
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how one can load appropriate GeneChip (cdf, etc.) env. by just reading Probe IDs,
probe probe
17.4 years ago SAURIN ★ 1.1k
0
votes
3
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1.9k
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biobase phenodata
updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 150
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1
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1.4k
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Agilent Human Genome CGH 44K annotation
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updated 17.4 years ago by 21k • written 17.4 years ago by ★ 1.9k
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log error
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17.4 years ago hemant ritturaj ▴ 150
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limma contrasts with multiple groups
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updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 150
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3
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Running R without X11?
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0
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1.1k
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Statistics in Biology Conference
17.4 years ago David Henderson ▴ 20
0
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1
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867
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DNASuffixArray
Biostrings Biostrings
updated 17.4 years ago by 16k • written 17.4 years ago by ▴ 20
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Using limma for omnibus F tests
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17.4 years ago Gordon Smyth 53k
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1
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1.1k
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Lumi and Beadstudio 1.5.13
updated 17.4 years ago by ★ 1.2k • written 17.4 years ago by ▴ 210
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0
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Q: phantom probsets created by combineAffyBatch?
17.4 years ago Irina Klaman ▴ 10
0
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0
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Sc03b_MR_v04 CDF package
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17.4 years ago Ludo Muller ▴ 50
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Limma: What to choose?
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updated 17.4 years ago by ▴ 390 • written 17.4 years ago by 16k
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reasonable Illumina hyperG test
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updated 17.4 years ago by 68k • written 17.4 years ago by ▴ 370
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graph for microarray data
updated 17.4 years ago by 68k • written 17.4 years ago by ★ 1.1k
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2
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GO term enrichment analysis over whole genome, copy number aberration investigation
Annotation GO Annotation GO
updated 17.4 years ago by ★ 7.2k • written 17.4 years ago by ▴ 100
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3
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a couple of questions on PGSEA package and GSEA
PGSEA PGSEA
updated 17.4 years ago by ▴ 210 • written 17.4 years ago by ★ 1.2k
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black lokal lädt dich zu den lokalisten ein.
17.4 years ago friends@lokalisten.de ▴ 30
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RSQLite installation question
updated 17.4 years ago by ★ 6.5k • written 17.4 years ago by 16k
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HOPACH and .cdt which doesn't work with javatreeview
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17.4 years ago Sébastien Tourlet ▴ 20
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updated 17.4 years ago by ▴ 40 • written 17.4 years ago by ▴ 300
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heatmap.2 question - plotting gene expression ordered by a vector
updated 17.4 years ago by 21k • written 17.4 years ago by ▴ 930
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Assess inter-study consistency
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updated 17.4 years ago by ▴ 750 • written 17.4 years ago by ▴ 300
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Problem installing Biobase on Solaris
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updated 17.4 years ago by 16k • written 17.4 years ago by ▴ 200
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Drawing induced GO graphs
17.4 years ago Elliot Kleiman ▴ 150
0
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1
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arrayQualityMetrics, Outlier
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updated 17.4 years ago by ▴ 280 • written 17.4 years ago by ▴ 200
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Illumina BeadChips and beadarray
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updated 17.4 years ago by ▴ 120 • written 17.4 years ago by ▴ 620
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0
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3 Courses*** R/Splus Fundamentals and Programming Techniques: September 2008 at 3 locations by XLSolutions Corp
17.4 years ago sue@xlsolutions-corp.com ▴ 570
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installing problem - preprocessCore, affy on linux platform
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Using limma for omnibus F tests
limma limma
17.4 years ago Gavin Kelly ▴ 50
0
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2
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GO over representation analysis
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updated 17.4 years ago by ▴ 220 • written 17.4 years ago by ★ 7.2k
0
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0
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How to interpret the vst transformation of illumina
17.4 years ago Pan Du ★ 1.2k
0
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1
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How to interpret the vst transformation of illumina expression data?
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LOH analysis for illumina data
SNP Cancer Prostate SNP Cancer Prostate
17.4 years ago Yu Chuan Tai ▴ 440
46,726 results • Page 740 of 935
Recent ...
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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by ATpoint ★ 5.0k
Yes, still it's not reproducible, yet hard to debug. I cannot reproduce myself either.
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening in a clean install
Votes
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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