0
votes
1
reply
953
views
Difference value from MAS from affy in R vs. MAS 5.0 Microarray suite
affy affy
updated 22.2 years ago by ★ 2.3k • written 22.2 years ago by ▴ 50
0
votes
0
replies
912
views
gcrma commands in expresso function
gcrma gcrma
22.2 years ago Anthony Bosco ▴ 500
0
votes
1
reply
821
views
RMA on affy package
updated 22.2 years ago by ★ 2.3k • written 22.2 years ago by ▴ 10
0
votes
1
reply
408
views
singlearrayerrormodel
updated 22.2 years ago by ★ 13k • written 22.2 years ago by ▴ 10
0
votes
0
replies
802
views
segmentation fault with using normalize.quantiles(), affy library
affy affy
22.2 years ago Siew Leng TENG ▴ 10
0
votes
2
replies
869
views
cdf files
cdf convert cdf convert
updated 22.2 years ago by ★ 2.3k • written 22.2 years ago by ▴ 20
0
votes
1
reply
1.0k
views
re-built a GO package by using function "GOPkgBuilder"?
GO GO
updated 22.2 years ago by ★ 2.9k • written 22.2 years ago by ▴ 80
0
votes
0
replies
719
views
Difference between the analysis of cDNA, spotted oligo arrays and comparative genomics hybridization?
22.2 years ago Gordon Smyth 53k
0
votes
1
reply
1.2k
views
Difference between the analysis of cDNA, spotted oligo arrays and comparative genomics hybridization?
updated 22.2 years ago by ▴ 920 • written 22.2 years ago by ▴ 100
0
votes
1
reply
1.2k
views
inconsistent annotation between "getGO()" and "getGO()"
Annotation Annotation
updated 22.2 years ago by ★ 2.9k • written 22.2 years ago by ▴ 80
0
votes
3
replies
1.1k
views
Status of binary CEL file support
updated 22.2 years ago by 68k • written 22.2 years ago by ★ 1.1k
0
votes
0
replies
1.0k
views
problem loading ontoTools
ontoTools ontoTools
22.2 years ago Nicholas Lewin-Koh ▴ 430
0
votes
1
reply
1.6k
views
Annotating yeast ORFs with GO and KEGG
GO Yeast annotate Category GO Yeast annotate Category
updated 22.2 years ago by ▴ 70 • written 22.2 years ago by ▴ 80
0
votes
1
reply
986
views
A question about multiple analysis
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 770
0
votes
1
reply
902
views
limma design matrix question
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 770
0
votes
0
replies
966
views
very small fold change from RMA data
affy GeneSpring affy GeneSpring
22.2 years ago Qiang Li ▴ 10
0
votes
0
replies
1.0k
views
Problems about Heatmap
22.2 years ago Shih-Te Yang ▴ 80
0
votes
0
replies
1.1k
views
Bioconductor
Microarray Normalization Cancer multtest siggenes convert Microarray Normalization Cancer
22.2 years ago James W. MacDonald 68k
0
votes
0
replies
782
views
Bioconductor
Microarray Normalization Microarray Normalization
22.2 years ago Robert Cribbie ▴ 20
0
votes
3
replies
1.5k
views
Rgraphviz build problems
Rgraphviz Rgraphviz
updated 22.2 years ago by ▴ 810 • written 22.2 years ago by 21k
0
votes
2
replies
1.4k
views
Probe Cell
probe PROcess probe PROcess
updated 22.2 years ago by ▴ 220 • written 22.2 years ago by ▴ 30
0
votes
2
replies
930
views
Rdbi/RdbiPgSQL fixes
updated 22.2 years ago by ★ 2.9k • written 22.2 years ago by ▴ 10
0
votes
0
replies
950
views
multtest problem
GUI multtest GUI multtest
22.2 years ago Josephine.Liang@uchsc.edu ▴ 60
0
votes
1
reply
1.2k
views
Limma issues.
Pathways limma Pathways limma
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 150
0
votes
2
replies
1.0k
views
More than one weight with marrayRaw class
marray marray
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 90
0
votes
1
reply
959
views
Limma
limma limma
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 10
0
votes
2
replies
1.2k
views
[marrayNorm] Is it possible to obtain normalized intensity values ?
updated 22.2 years ago by ▴ 920 • written 22.2 years ago by ▴ 770
0
votes
0
replies
1.3k
views
Re: [R] A co-occurrence matrix
22.2 years ago Sean Davis 21k
0
votes
1
reply
5.2k
views
Clustering in R....
Clustering Clustering
updated 22.2 years ago by 21k • written 22.2 years ago by ▴ 150
0
votes
2
replies
835
views
Problems reading in Imagene files
limma limma
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 50
0
votes
4
replies
1.2k
views
Problem outputting normalized file
Cancer Cancer
updated 22.2 years ago by ★ 2.2k • written 22.2 years ago by ★ 2.0k
0
votes
1
reply
1.6k
views
using marrayInput package with GenePix .gpr file - read.GenePix()
GO marray GO marray
updated 22.2 years ago by ▴ 920 • written 22.2 years ago by ▴ 10
0
votes
0
replies
1.3k
views
PSB Extended WorkShop on Alternative Splicing
Microarray Annotation GO Microarray Annotation GO
22.2 years ago Wang, Hui ▴ 170
0
votes
3
replies
1.2k
views
[limma] How do I set "spacing" in lmFit ???
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 770
0
votes
1
reply
879
views
[limma] Design and contrast matrices question
limma limma
updated 22.2 years ago by 53k • written 22.2 years ago by 21k
0
votes
1
reply
968
views
normalizing 133 a and b
updated 22.2 years ago by ▴ 20 • written 22.2 years ago by ▴ 230
0
votes
2
replies
895
views
download page for all packages?
reposTools reposTools
updated 22.2 years ago by ★ 5.5k • written 22.2 years ago by ▴ 20
0
votes
1
reply
1.1k
views
Error message in MDiagnPlots1
Cancer Cancer
updated 22.2 years ago by ▴ 920 • written 22.2 years ago by ★ 2.0k
0
votes
1
reply
1.0k
views
add gcrma to bgcorrect methods in rma
gcrma gcrma
updated 22.2 years ago by ▴ 70 • written 22.2 years ago by ▴ 500
0
votes
1
reply
951
views
limma toptable output
limma limma
updated 22.2 years ago by ▴ 1000 • written 22.2 years ago by ★ 1.4k
0
votes
1
reply
1.6k
views
Stange tailing in a Volcano-plot
limma limma
updated 22.2 years ago by 53k • written 22.2 years ago by ▴ 30
0
votes
0
replies
795
views
Re; MAGEML
ArrayExpress ArrayExpress
22.2 years ago Steffen Durinck ▴ 420
0
votes
0
replies
782
views
Re:MAGEML
ArrayExpress ArrayExpress
22.2 years ago Steffen Durinck ▴ 30
0
votes
2
replies
1.2k
views
Re: read.GenePix() function
updated 22.2 years ago by ▴ 920 • written 22.2 years ago by ▴ 60
0
votes
0
replies
844
views
Locate genes on M v A plot
probe probe
22.2 years ago Anthony Bosco ▴ 500
0
votes
0
replies
846
views
unusual ratio
22.2 years ago Anthony Bosco ▴ 500
0
votes
1
reply
1.1k
views
Software for clest?
updated 22.2 years ago by ▴ 170 • written 22.2 years ago by ▴ 80
0
votes
1
reply
865
views
Label genes on MvA plot
affy affy
updated 22.2 years ago by 68k • written 22.2 years ago by ▴ 500
0
votes
2
replies
960
views
GCRMA error
moe430a moe430a
updated 22.2 years ago by ▴ 410 • written 22.2 years ago by ▴ 10
0
votes
3
replies
1.4k
views
mageml
ArrayExpress ArrayExpress
updated 22.2 years ago by 6.7k • written 22.2 years ago by ▴ 20
46,721 results • Page 910 of 935
Recent ...
Replies
Comment: Joining different datasets and analyzing using the group-specific condition effe by jason.chai • 0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
Comment: Questions about bacon QC and correction on EWAS results by sup0903 • 0
This is qq plot and histogram generated before bacon correction ![enter image description here][1] ![enter image description here][2] …
Comment: Ensembl site unresponsive via biomaRt by sebastianenewell • 0
> I think this is an unrelated issue. The original post includes the > message Error: 'curl_parse_url' is not an exported object from > 'na…
Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Popular Question to maltethodberg ▴ 180
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Great Question to fl ▴ 20
Locations • All
Pacific Ocean, 8 minutes ago
The city by the bay, 13 minutes ago
Denmark, 22 minutes ago
United Kingdom, 1 hour ago
South Korea, 1 hour ago
Traffic: 1611 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6