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ASpli
•
reset
1
vote
11
replies
2.0k
views
Aspli: error with gbCounts
Aspli
ASpli
3.1 years ago • updated 3.0 years ago
jbono
▴ 10
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by
Ines
• 0 • written 3.0 years ago by
Emma
▴ 20
5
votes
6
replies
852
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
martin.grigorov
▴ 10
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.2 years ago by
hamza_karakurt
▴ 50 • written 3.0 years ago by
stephen66
▴ 50
0
votes
3
replies
3.4k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 7 months ago by
andresrabinovich
• 0 • written 19 months ago by
thithusuong.nguyen
• 0
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.2 years ago by
hojka.anna
▴ 10 • written 6.4 years ago by
daniele.ottaviani
▴ 10
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.2 years ago
fernandalpcosta
▴ 10
0
votes
1
reply
655
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 15 months ago by
Sophie
• 0 • written 15 months ago by
salvocomplicazioni1
• 0
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 21 months ago by
lincango_marco
• 0 • written 2.7 years ago by
Dmitri
• 0
0
votes
1
reply
592
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
0
votes
1
reply
896
views
Splicing analysis with ASpli
ASpli
updated 6.2 years ago by
Dario Strbenac
★ 1.5k • written 6.2 years ago by
jovel_juan
▴ 30
0
votes
1
reply
800
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.7 years ago by
emancini
▴ 50 • written 4.8 years ago by
mgdrnl
• 0
0
votes
0
replies
98
views
I am trying to detect alternative splicing.
ASpli
16 days ago
Sebashish
• 0
0
votes
0
replies
612
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.2 years ago
hamza_karakurt
▴ 50
0
votes
0
replies
237
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
9 weeks ago
vipul14
• 0
0
votes
0
replies
897
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.4 years ago
abdul rawoof
▴ 60
0
votes
0
replies
946
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.4 years ago
nicolas.guyon2
• 0
0
votes
0
replies
1.0k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.9 years ago
arphatak
• 0
0
votes
0
replies
818
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.9 years ago
dina.hesham139
• 0
19 results • Page
1 of 1
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Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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