Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Aspli
•
reset
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by
Ines
• 0 • written 3.0 years ago by
Emma
▴ 20
5
votes
6
replies
845
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
martin.grigorov
▴ 10
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.2 years ago
fernandalpcosta
▴ 10
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.2 years ago by
hojka.anna
▴ 10 • written 6.4 years ago by
daniele.ottaviani
▴ 10
1
vote
11
replies
1.9k
views
Aspli: error with gbCounts
Aspli
ASpli
3.1 years ago • updated 3.0 years ago
jbono
▴ 10
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.2 years ago by
hamza_karakurt
▴ 50 • written 3.0 years ago by
stephen66
▴ 50
0
votes
0
replies
940
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.4 years ago
nicolas.guyon2
• 0
0
votes
1
reply
796
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.7 years ago by
emancini
▴ 50 • written 4.8 years ago by
mgdrnl
• 0
0
votes
1
reply
587
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
0
votes
0
replies
1.0k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.9 years ago
arphatak
• 0
0
votes
3
replies
3.3k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 7 months ago by
andresrabinovich
• 0 • written 18 months ago by
thithusuong.nguyen
• 0
0
votes
0
replies
814
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.8 years ago
dina.hesham139
• 0
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 21 months ago by
lincango_marco
• 0 • written 2.7 years ago by
Dmitri
• 0
0
votes
0
replies
227
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
8 weeks ago
vipul14
• 0
0
votes
1
reply
648
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 14 months ago by
Sophie
• 0 • written 15 months ago by
salvocomplicazioni1
• 0
0
votes
0
replies
89
views
I am trying to detect alternative splicing.
ASpli
11 days ago
Sebashish
• 0
0
votes
0
replies
610
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.2 years ago
hamza_karakurt
▴ 50
0
votes
1
reply
889
views
Splicing analysis with ASpli
ASpli
updated 6.1 years ago by
Dario Strbenac
★ 1.5k • written 6.2 years ago by
jovel_juan
▴ 30
0
votes
0
replies
893
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.4 years ago • updated 5.3 years ago
abdul rawoof
▴ 60
19 results • Page
1 of 1
Recent ...
Replies
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…
Comment: Differences in differential analysis methods for RNA-Seq
by
james.zhang20
• 0
Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…
Comment: Deseq2 and Normalization of RNA sequencing data
by
ATpoint
★ 4.1k
There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …
Comment: Differences in differential analysis methods for RNA-Seq
by
ATpoint
★ 4.1k
MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…
Comment: Get genomic coordinates of CpGs sites (chromosomes, genomic position)
by
Yveto
• 0
Thank for your response. It is Illumina 450 K. I use this code ```{r } library(IlluminaHumanMethylation450kanno.ilmn12.hg19) annotat…
Votes
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
SPIA plotP giving error
Awards
• All
Popular Question
to
siajunren
• 0
Scholar
to
Rory Stark
★ 5.2k
Popular Question
to
tangming2005
▴ 190
Popular Question
to
Ian D.
▴ 70
Popular Question
to
junhui.li11
• 0
Locations
• All
South Africa,
1 minute ago
WEHI, Melbourne, Australia,
1 minute ago
France,
15 minutes ago
United Kingdom,
24 minutes ago
Germany,
40 minutes ago
Traffic: 767 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6