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Job: Faculty position: Lecturer/Senior Lecturer (Bioinformatics/Computational Biology) at University of Wollongong Australia
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3.1 years ago hyu • 0
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Job: Bioinformatics Research Associate, University of Adelaide
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written 10.5 years ago by ▴ 170
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Job: Postdoctoral Scientist in Statistical Bioinformatics and Software Development, WEHI, Melbourne, Australia
Australia
updated 4.3 years ago by • 0 • written 4.3 years ago by 53k
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Job: Postdoctoral Scientist in Statistical Bioinformatics, WEHI, Melbourne, Australia
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4.3 years ago Gordon Smyth 53k
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Job: Statistical Bioinformatics Laboratory Head, WEHI, Melbourne, Australia
JobPosting Australia
4.7 years ago • updated 4.5 years ago Gordon Smyth 53k
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Job: Computational Biology Lab Head, Brain Cancer Centre, Melbourne, Australia
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4.6 years ago • updated 4.3 years ago Gordon Smyth 53k
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Job: Postdoctoral researcher, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Research, Australia
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9.1 years ago Gordon Smyth 53k
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Job: Postdoctoral Bioinformatics Analyst, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Research, Australia
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9.1 years ago Gordon Smyth 53k
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Job: Postdoctoral position, Bioinformatics Division, Walter and Eliza Hall Institute of Medical Research, Australia
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9.5 years ago Gordon Smyth 53k
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Job: Senior Postdoctoral Fellow in Computational Biology/Bioinformatics : Adelaide, Australia
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9.6 years ago david.lynn • 0
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Job: Bioinformatics Researcher - University of Adelaide, South Australia
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10.1 years ago Steve Pederson ▴ 170
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Job: Senior Bioinformatics Researcher - University of Adelaide, South Australia
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10.1 years ago Steve Pederson ▴ 170
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Job: Bioinformatics Laboratory Head, Walter and Eliza Hall Institute of Medical Research
WEHI Australia Job
10.6 years ago • updated 10.5 years ago Gordon Smyth 53k
13 results • Page 1 of 1
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Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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Popular Question to James W. MacDonald 68k
Popular Question to Gordon Smyth 53k
Commentator to sina.nassiri ▴ 130
Popular Question to Hervé Pagès 16k
Popular Question to jared.andrews07 ▴ 30
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