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BSgenome forge
•
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1.4k
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BSgenomeForge version 1.52.0, error in .TwoBits_export
bsgenome forge
twobits_export
bioconductor
5.5 years ago
bioinagesh
• 0
0
votes
7
replies
2.2k
views
BSgenomeForge error in .TwoBits_export
bsgenome forge
TwoBits_export
updated 7.4 years ago by
Hervé Pagès
16k • written 7.4 years ago by
stu111538
• 0
2
votes
5
replies
2.6k
views
Forge a BSgenome data package
bsgenome
bsgenome forge
8.0 years ago • updated 7.6 years ago
jodiera
• 0
0
votes
3
replies
1.3k
views
BSGenome problem with forgeBSgenomeDataPkg command
bsgenome forge
8.6 years ago
pj dias
▴ 60
3
votes
2
replies
1.4k
views
CRISPRseek with (rough) Draft Genome
crisprseek
grna searching
bsgenome forge
offtarget analysis
updated 8.7 years ago by
Hervé Pagès
16k • written 8.7 years ago by
rajewski23
• 0
0
votes
1
reply
1.5k
views
Error from BSgenome forge using .2bit file
BSgenome forge
2bit
bsgnome forge
2bit file
updated 9.9 years ago by
Hervé Pagès
16k • written 9.9 years ago by
mbk0asis
• 0
2
votes
1
reply
1.6k
views
How do I create BSgenome Bos_taurus_UMD3.1?
bsgenome forge
bovine
updated 9.9 years ago by
Hervé Pagès
16k • written 9.9 years ago by
mbk0asis
• 0
7 results • Page
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Comment: Store Matrix in DataFrame Cell
by
Dario Strbenac
★ 1.6k
It does not appear to work. > DataFrame(name = "test", value = list(matrix(1:4, ncol = 2))) DataFrame with 2 rows and 3 columns …
Comment: Overcoming confounding in batch effect correction
by
Dario Strbenac
★ 1.6k
Actually, it is directly related. ComBat-seq is a part of [sva][1] package. It should use sva tag. [1]: https://bioconductor.org/package…
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.7k
biostars.org and the [bioinformatics reddit][1] are suitable and have much larger audience than this forum here. [1]: https://www.reddi…
Comment: Overcoming confounding in batch effect correction
by
bbao
▴ 10
Thank you! And apologies for posting here. Do you know which forum I should go to in the future for questions like these?
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
interesting. it could be since this is not your installation that it was installed by an admin that you do not have access to perform this…
Votes
Comment: Overcoming confounding in batch effect correction
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
Comment: Overcoming confounding in batch effect correction
Overcoming confounding in batch effect correction
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