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Showing :
BSgenome
•
reset
2
votes
4
replies
535
views
Need help generating BSgenome and orgdb
OrgDb
BSgenome
6 months ago • updated 12 weeks ago
mat149
▴ 70
2
votes
3
replies
862
views
Request : Add Chinese Spring Wheat genome to BSgenome
BSgenome
updated 3 months ago by
eviatar.weizman
• 0 • written 24 months ago by
remerandmaxence
▴ 10
1
vote
4
replies
742
views
Submitting BSgenome package for a new assembly
bsgenome
GenomicFeatures
package
updated 11 months ago by
Hervé Pagès
16k • written 11 months ago by
Manish
• 0
1
vote
6
replies
744
views
Help creating BSgenome object for new canine and feline genomes?
BSgenome
updated 9 weeks ago by
James W. MacDonald
65k • written 12 weeks ago by
Kate
• 0
1
vote
3
replies
587
views
Using injectSNPs with a custom set of SNPs
SNPlocs
BSgenome
written 6 months ago by
Stevie Pederson
• 0
0
votes
3
replies
694
views
Get Intron Seq
intron
BSgenome.Hsapiens.UCSC.hg38
BSgenome
updated 10 months ago by
ATpoint
★ 4.1k • written 10 months ago by
Lillian
• 0
0
votes
4
replies
953
views
BSgenome for ensembl mm10
BSgenomeForge
BSgenome
updated 10 months ago by
James W. MacDonald
65k • written 10 months ago by
kyliecode
• 0
7 results • Page
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Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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