Bioconductor BSgenome

Showing : BSgenome • reset

vote

replies

742

views

BSgenome

updated 9 weeks ago by James W. MacDonald 65k • written 11 weeks ago by Kate • 0

vote

replies

587

views

SNPlocs BSgenome

written 6 months ago by Stevie Pederson • 0

votes

replies

535

views

OrgDb BSgenome

6 months ago • updated 12 weeks ago mat149 ▴ 70

votes

replies

951

views

BSgenomeForge BSgenome

updated 10 months ago by James W. MacDonald 65k • written 10 months ago by kyliecode • 0

votes

replies

861

views

BSgenome

updated 3 months ago by eviatar.weizman • 0 • written 24 months ago by remerandmaxence ▴ 10

votes

replies

694

views

intron BSgenome.Hsapiens.UCSC.hg38 BSgenome

updated 10 months ago by ATpoint ★ 4.1k • written 10 months ago by Lillian • 0

vote

replies

742

views

bsgenome GenomicFeatures package

updated 11 months ago by Hervé Pagès 16k • written 11 months ago by Manish • 0

7 results • Page 1 of 1

Recent ...

Replies

Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

Votes

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

Awards • All

Popular Question to rohitsatyam102 ▴ 20