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Job: Postdoctoral Position in Bioinformatics to study Gene Regulatory Networks (University of Basel, Basel, Switzerland)
PostDoc JobPosting Basel Switzerland
3.0 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Core Facility (100%)
JobPosting Job Switzerland Basel
3.8 years ago Robert Ivanek ▴ 750
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Job: Computational biology of cancer (Postdoc Position)
JobPosting Basel Switzerland
3.9 years ago Robert Ivanek ▴ 750
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Job: Data Scientist Proteomics (100%), Biozentrum, University of Basel, Switzerland
Switzerland JobPosting Basel Proteomics
4.0 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Experimental Cancer Research (80-100%)
Switzerland Bioconductor Basel job
4.1 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Fellow in Genomics (University of Basel, Switzerland)
PostDoc Basel Switzerland Job
5.7 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Position: Posttranscriptional gene regulation in T cells (analysis of RNAseq, metabolomics)
Basel switzerland RNAseq metabolomics Job
6.7 years ago Robert Ivanek ▴ 750
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Comment: How to annotate a limma Elist raw class object with an annotation file by James W. MacDonald 67k
Oh right. My bad. Good for you though, figuring out that it's ENTREZID, not ENTREZGENE. You did a good job of reading the error message in …
Comment: Differential Expression Genes as Independent Variables by James W. MacDonald 67k
Both true, so a poor suggestion on my part. I am also unclear as to how one would use a single observation (the gene expression measures)…
Answer: How to annotate a limma Elist raw class object with an annotation file by giulia.gentile • 0
Good afternoon, Thank you for your explanation and suggestion to overcome the issue by annotating directly from the genome-wide annotation…
Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Aaron Lun ★ 28k
IIRC loading ~million cells into memory took about 3-5 minutes, but that was with a rather slow filesystem (HDD on a HPC), so YMMV dependin…
Comment: Differential Expression Genes as Independent Variables by Gordon Smyth 52k
Does not allow mixed models. And is for a different purpose to what your aims seem to be: it's purely for prediction rather than for testin…
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Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
A: DESeq2 One-way ANOVA with 3 sample groups?
conumee with Infinium MethylationEPIC v2.0
A: How to bin a GRanges to small bins
C: How to bin a GRanges to small bins
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